Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B19
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical pr...   102   4e-22
U66217-1|AAB07466.1|   86|Caenorhabditis elegans ZK563.5 protein.      46   4e-05
L16560-5|AAA27996.1|  443|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF022974-5|AAC48036.3|  347|Caenorhabditis elegans Seven tm rece...    29   4.2  
AC025716-19|AAK39602.2|  549|Caenorhabditis elegans Hypothetical...    29   4.2  
U80443-1|AAB37672.1|  186|Caenorhabditis elegans Hypothetical pr...    24   5.3  
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U80847-1|AAB37983.2|  738|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U41278-1|AAK31511.1|  305|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U40419-3|AAK67216.3|  260|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AL032642-3|CAA21654.1|  336|Caenorhabditis elegans Hypothetical ...    28   9.6  

>U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical
           protein ZK563.5 protein.
          Length = 239

 Score =  102 bits (244), Expect = 4e-22
 Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
 Frame = +1

Query: 115 MAHVQ-FVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLNG 291
           M+HV    DE+VR YL  +   ++LKAFD +    K+  ++VD+ I+++   I+  D++ 
Sbjct: 1   MSHVSNSTDEVVRNYLAAKSMVTSLKAFDQESSFAKEANYQVDRCIDEMTDAIDKHDVDT 60

Query: 292 LKEYWSHLDSLIFTKLEIHVQPAIRKLEYSLYKLYLVTAAQNTSLIRNEKITDFFNKMLP 471
           L   W   ++ +F  L+       +  E S Y+L+LV   Q  ++    K  +FF KM  
Sbjct: 61  LCAMWESWNARVFHSLDTEGIKQAQCYEASAYRLFLVRCVQKKNI---SKCNEFFRKMSS 117

Query: 472 ELQGQNEWKEWFTFPYIQKPEENPSFSLYFTRAWQDSVLVSLHNLLAT 615
                 +W +WF FPY    ++   F  YF + W +   VSLHN L+T
Sbjct: 118 LTLNNPQWADWFAFPYNHHAKDTEPFRKYFDKTWIEIYYVSLHNFLST 165


>U66217-1|AAB07466.1|   86|Caenorhabditis elegans ZK563.5 protein.
          Length = 86

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 490 EWKEWFTFPYIQKPEENPSFSLYFTRAWQDSVLVSLHNLLAT 615
           +W EWF FP+    ++   F  YF + W +   VSLHN L+T
Sbjct: 4   QWAEWFXFPHNHHAKDTEPFXKYFDKTWIEIYYVSLHNFLST 45


>L16560-5|AAA27996.1|  443|Caenorhabditis elegans Hypothetical
           protein D2007.5 protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 172 FASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVS 279
           F    + F+ND+ +D  KG +  KI E +  F N+S
Sbjct: 142 FVIMYRVFENDISSDMGKGKKTRKIGELVSKFGNIS 177


>AF022974-5|AAC48036.3|  347|Caenorhabditis elegans Seven tm
           receptor protein 208 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 9/38 (23%), Positives = 25/38 (65%)
 Frame = +1

Query: 583 VLVSLHNLLATVFQCMPQPTLTSYESDAILVKKLQDKL 696
           +L+++  ++ +V + + +PT TS+ S  +++  ++D L
Sbjct: 46  ILIAMFEIIYSVLEVLVKPTFTSFGSTFVMIVNVRDSL 83


>AC025716-19|AAK39602.2|  549|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.17 protein.
          Length = 549

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 427 IRNEKITDFFNKMLPELQGQNEWKEWFTFPYIQKPEENPSFS 552
           I   K TDFF+K + +   +N+    F+F  IQK E+   FS
Sbjct: 425 IFQRKKTDFFSKKIKKKLSKNDKFLVFSFKTIQKKEKTAFFS 466


>U80443-1|AAB37672.1|  186|Caenorhabditis elegans Hypothetical
           protein C24A11.2 protein.
          Length = 186

 Score = 24.2 bits (50), Expect(2) = 5.3
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -3

Query: 338 NFVKIRESKCDQYSFKPLRSETLMKCIICSIILSTLKPLSLSAFKSLSNAF 186
           N +K+R S  D+ S     SET  K  +C I  S L PL       ++N +
Sbjct: 97  NNIKMRNSVGDEES-----SETKCKKKVCGIFQSWLHPLRNREIDRMNNIY 142



 Score = 23.0 bits (47), Expect(2) = 5.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 494 HSFCPCNSGNILLKKSV 444
           HSF P N  NI ++ SV
Sbjct: 89  HSFPPINENNIKMRNSV 105


>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
           protein F55A3.3 protein.
          Length = 1030

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 103 LGQNMAHVQFVDELVREYLLFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMH 264
           L QN  + +  D L+R  ++ +    +L+A  N  +    +G R+D +   I H
Sbjct: 653 LSQNKLNPKLKDLLIRPNIIQKRITGSLEAHTNGFRYTSLRGDRIDVLYNNIKH 706


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +1

Query: 547  FSLYFTRAWQDSVLVSLHNLLATVFQCMPQPTLTSYESDAILVKKLQDKLAAVSGKTLQQ 726
            F +  TRA +   +VS    LA   +   + T+T YE     +K+ ++++A + G+ L+ 
Sbjct: 2091 FKMINTRA-EKLKMVSTITKLAKKKREEVRKTMTKYEKGMEKMKRAEEQVAGMQGELLRL 2149

Query: 727  QP 732
            QP
Sbjct: 2150 QP 2151


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +1

Query: 547  FSLYFTRAWQDSVLVSLHNLLATVFQCMPQPTLTSYESDAILVKKLQDKLAAVSGKTLQQ 726
            F +  TRA +   +VS    LA   +   + T+T YE     +K+ ++++A + G+ L+ 
Sbjct: 2091 FKMINTRA-EKLKMVSTITKLAKKKREEVRKTMTKYEKGMEKMKRAEEQVAGMQGELLRL 2149

Query: 727  QP 732
            QP
Sbjct: 2150 QP 2151


>U80847-1|AAB37983.2|  738|Caenorhabditis elegans Hypothetical
           protein C17H11.2 protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +1

Query: 445 TDFFNKMLPELQGQNEWKEWFTFPYIQKPE 534
           TDF + ++PEL    +++ +  FP +++PE
Sbjct: 482 TDFSSVVVPELLMNTKFEVYIRFPLLERPE 511


>U41278-1|AAK31511.1|  305|Caenorhabditis elegans Hypothetical
           protein F33G12.2 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +1

Query: 208 KADKDKGFRVD-KIIEQIMHFINVSDLNGLKEYWSHLDSLIFTKLEIHVQPAIRKLEYSL 384
           K  ++  +++D ++++ I H  + S+ +G    +S LDS I +KLE H    I  L    
Sbjct: 221 KGHQNTEYKLDCRVLQSIEHVASGSE-DGFVYVYSLLDSHIVSKLE-HPSKVIHSLTAHP 278

Query: 385 YKLYLVTAA 411
            K  L+TAA
Sbjct: 279 KKERLMTAA 287


>U40419-3|AAK67216.3|  260|Caenorhabditis elegans Hypothetical
           protein C27F2.9 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 496 KEWFTFPYIQKPEENP 543
           K WF +PY Q+P  NP
Sbjct: 188 KRWFLYPYEQRPNWNP 203


>U22832-3|AAA64508.2|  359|Caenorhabditis elegans Hypothetical
           protein C09F5.3 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = -3

Query: 341 SNFVKIRESKCDQYSFKP-----LRSETLMKCIICSIILSTLKPL 222
           S+ VK  E   D +S  P     ++ E L+KC +CS + S++  L
Sbjct: 47  SSHVKQEERADDSHSNSPASSKSIKQENLLKCELCSTVCSSISQL 91


>AL032642-3|CAA21654.1|  336|Caenorhabditis elegans Hypothetical
           protein Y48A6C.4 protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 160 LFRGFASTLKAFDNDLKADKDKGFRVDKIIEQIMHFINVSDLN 288
           L R  A     F N L + K   +    +I+ I++FIN+ D+N
Sbjct: 179 LCRNHADLFPCFINYLGSSKRLAWNKPGLIDTILNFINIYDIN 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,090,637
Number of Sequences: 27780
Number of extensions: 356905
Number of successful extensions: 1052
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)