Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_B18
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 33 0.26
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 31 0.81
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 30 2.5
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 30 2.5
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 29 3.3
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 29 3.3
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 29 3.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.3
Z81489-9|CAE17759.1| 326|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 7.5
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 7.5
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 7.5
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 28 7.5
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 7.5
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 28 9.9
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 28 9.9
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical protein
T20F7.5 protein.
Length = 1065
Score = 34.7 bits (76), Expect = 0.087
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +3
Query: 387 NMSDCTKTVNCPICNRSFENTEIEEHVNKCLFLNSCEK---SNSKRQGQQLLSPNEKRKK 557
++ C + P N++ ++ + ++ + + F +SC K S + +Q N K+K
Sbjct: 788 SVDSCRSESSLPNHNQNSDDDDEQDGIGRSGFSSSCSKYQHSVASSSAEQEELKNLKKKL 847
Query: 558 VEKLTALPPNLKSSQSQKISTNENIKIPLSESLRPKSLDQIVGQK 692
+ KL +S +S+ +T NIK+ + P +DQ V QK
Sbjct: 848 LNKLNK-EKKKRSKKSRFEATKSNIKVSPNIDECPDEIDQSVIQK 891
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 522 FYGPPGCGKTLLAKAIANECQ 542
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 521 FYGPPGCGKTLLAKAIANECQ 541
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICK 820
F G PGCGKT LA I+N C+
Sbjct: 521 FYGPPGCGKTLLAKAIANECQ 541
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 609 KISTNENIKIPLSESLRPKSLDQIVGQKQSFGTDSMLRSMLEQNKIPNMILWG 767
K++T +P E RP LD++V +Q T L +E +P+++ +G
Sbjct: 20 KMTTTTASNLPWVEKYRPSKLDELVAHEQIVKT---LTKFIENRTLPHLLFYG 69
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 438 FENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNLKSSQSQKI 614
FENT VN+ LNS +K + + S ++ L+++ P +K SQS+ +
Sbjct: 295 FENTMFNICVNESAVLNSKDKVPYVFFAEVIRSSPNYNSNIKTLSSVEPRIKKSQSESV 353
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 408 TVNCPICNRSFENTEIEEHVNKCLFLNSCEK 500
T CPIC+R F + +E+H + C L S +
Sbjct: 20 TFPCPICDRRFIKSSLEKHESACRKLASLHR 50
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 381 YKNMSDCT--KTVNCPICNRSFENTEIEEHVNKC 476
+ ++S+CT ++ C C R F ++E+H KC
Sbjct: 97 HDHLSECTFKSSLKCEKCGRQFAKNDLEKHRAKC 130
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = -1
Query: 559 TFFLFSFGDNSC--CPCLFE------LDFSHELRKRHLFTCSSISVFSKLLLHIGQFTV 407
T ++F DN C C LFE D + L T +SV K L H+G+FT+
Sbjct: 146 TIYIFKHRDNKCYRCVILFEDGDNNVSDADRKYMVAFLDTPQVVSVKLKTLFHLGKFTI 204
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 381 YKNMSDCT--KTVNCPICNRSFENTEIEEHVNKC 476
+ ++S+CT ++ C C R F ++E+H KC
Sbjct: 97 HDHLSECTFKSSLKCEKCGRQFAKNDLEKHRAKC 130
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 29.5 bits (63), Expect = 3.3
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Frame = +3
Query: 330 NIRLGLKVSSPGS*N*KYKNMSDCTKTVNCPICNRSFENTEIEEHVNKCLFLNSCEKSNS 509
N + LK+ S N + K D K +N R +E + E + E+ N+
Sbjct: 231 NNTMSLKLRSAEKKNSELKKSLDEMK-MNFKKFTREYEKEKRELEKQMDEQRQTLEQDNA 289
Query: 510 KRQGQQLLSPNEKRKKVE----KLTALPPNLKSSQSQKISTNENI--KIPLSESLRPK 665
+ Q + + E R++++ KL A PP SSQ Q + N+ K SL PK
Sbjct: 290 RNQSEYDMKMREMREELQNLERKLEARPPCCCSSQKQSEESERNVLSKREKLLSLEPK 347
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 459 EHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNLKSSQSQKISTNENIKI 638
E V C N E+ K++ + EK K+ E+ A P K S++ K+ST +
Sbjct: 398 EIVPVCGSPNLIEEKKQKKRKSTVAVVIEKEKEKEEDAAKSPMRKPSETPKVSTPKAAGT 457
Query: 639 PLSESLRPKS 668
PL++ + ++
Sbjct: 458 PLTKFFKKEN 467
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 459 EHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKVEKLTALPPNLKSSQSQKISTNENIKI 638
E V C N E+ K++ + EK K+ E+ A P K S++ K+ST +
Sbjct: 400 EIVPVCGSPNLIEEKKQKKRKSTVAVVIEKEKEKEEDAAKSPMRKPSETPKVSTPKAAGT 459
Query: 639 PLSESLRPKS 668
PL++ + ++
Sbjct: 460 PLTKFFKKEN 469
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 495 EKSNSKRQGQQLLSPNEKRKKVEKLTALPPN-LKSSQSQKISTNENIKIPLSESLRPKSL 671
EKS K ++L SP K K EK P + K +S + S E++K P + P+ +
Sbjct: 1605 EKSPEKSVVEELKSP--KEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKV 1662
Query: 672 DQ 677
++
Sbjct: 1663 EE 1664
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 495 EKSNSKRQGQQLLSPNEKRKKVEKLTALPPN-LKSSQSQKISTNENIKIPLSESLRPKSL 671
EKS K ++L SP K K EK P + K +S + S E++K P + P+ +
Sbjct: 1605 EKSPEKSVVEELKSP--KEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKV 1662
Query: 672 DQ 677
++
Sbjct: 1663 EE 1664
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 495 EKSNSKRQGQQLLSPNEKRKKVEKLTALPPN-LKSSQSQKISTNENIKIPLSESLRPKSL 671
EKS K ++L SP K K EK P + K +S + S E++K P + P+ +
Sbjct: 1605 EKSPEKSVVEELKSP--KEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKV 1662
Query: 672 DQ 677
++
Sbjct: 1663 EE 1664
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 495 EKSNSKRQGQQLLSPNEKRKKVEKLTALPPN-LKSSQSQKISTNENIKIPLSESLRPKSL 671
EKS K ++L SP K K EK P + K +S + S E++K P + P+ +
Sbjct: 1605 EKSPEKSVVEELKSP--KEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKV 1662
Query: 672 DQ 677
++
Sbjct: 1663 EE 1664
>Z81489-9|CAE17759.1| 326|Caenorhabditis elegans Hypothetical
protein C55A1.12 protein.
Length = 326
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 637 IFMFSFVLIFCDCELFKFGGKAVNFSTFFL 548
+ M F LI C ++F F KA+N STF++
Sbjct: 78 LMMVGF-LIICKFKIFNFPLKALNISTFYI 106
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 495 EKSNSK-RQGQQLLSPNEKRKKVEKLTALPPNLKS-SQSQKISTNENIKIPLSESLRPKS 668
EKSN + ++ Q +S ++ ++T+ P K S + K+ ENI + S R
Sbjct: 177 EKSNKQVKKPQCEISMENRQAGNNEMTSPEPTYKELSNTVKLLQQENINLKNSVQTRKDQ 236
Query: 669 LDQIVGQKQSF 701
Q+ QK+ +
Sbjct: 237 FSQLYAQKERY 247
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Frame = +3
Query: 381 YKNMSDCTKTVNCPICNRSFENTEIEEHVNKCLFLNSCEKSNSKRQGQQLLSPNEKRKKV 560
++ MS NC N FE + C F + + ++ +KV
Sbjct: 42 FRRMSVQKLVYNCKWSNNCFETSPYPLKCQSCRFQRCLDAGMYLEVHENIVEFENGNQKV 101
Query: 561 EKLTALPPNL---KSSQSQKISTNENIKIP-LSESLRPKSLDQIVGQKQSF 701
++LT L NL SS+ K+ T + P L+E L + + Q ++
Sbjct: 102 DELTTLLQNLLIMDSSRQHKLKTFYSFDNPSLAEILENPGVVTSINQGPNY 152
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 430 FYGPPGTGKTLVARALANECRRGANKVAFF 459
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 428 FYGPPGTGKTLVARALANECRRGANKVAFF 457
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 430 FYGPPGTGKTLVARALANECRRGANKVAFF 459
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 430 FYGPPGTGKTLVARALANECRRGANKVAFF 459
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 428 FYGPPGTGKTLVARALANECRRGANKVAFF 457
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 430 FYGPPGTGKTLVARALANECRRGANKVAFF 459
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical
protein B0464.6 protein.
Length = 643
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 537 PNEKRKKV-EKLTALPPNLKSSQSQKISTN-ENIKIPLSESLRPKSLDQIVGQKQSFGTD 710
PN ++ V K+ + PP +SS+S I + +N+ L S++ L + + FGT
Sbjct: 123 PNALKQLVYNKVQSKPPRPESSKSTPIVPDAQNV---LDTSVQSNDLSWVDAHR--FGTP 177
Query: 711 SMLRSMLEQNKIPN 752
S S L+Q+ PN
Sbjct: 178 SFKSSQLQQSPSPN 191
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 758 FVGSPGCGKTSLANVISNICKNKXXKFVXY 847
F G PG GKT +A ++N C+ K +
Sbjct: 430 FYGPPGTGKTLVARALANECRRGANKVAFF 459
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 764 GSPGCGKTSLANVISN 811
G PGCGKT LA ++N
Sbjct: 575 GPPGCGKTLLAKAVAN 590
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 764 GSPGCGKTSLANVISN 811
G PGCGKT LA ++N
Sbjct: 575 GPPGCGKTLLAKAVAN 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,717,100
Number of Sequences: 27780
Number of extensions: 369536
Number of successful extensions: 1295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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