Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B12
         (863 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    28   0.32 
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    26   1.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   3.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   6.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.1  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = -2

Query: 685 YFLHVLICLSHFSKIIIRSSSGNTKFFELFKSFYYSSLCLSMD*ILTLKLIQYWILS--R 512
           Y++  L+       ++       TK  +L  S+Y ++L LS    L  + + +  L   +
Sbjct: 125 YYVPALVLFGSIGNVLSVLVFFKTKLRKLSSSYYLAALGLSDTFYLIGQFVAWLNLVDLK 184

Query: 511 IILNITLTIFFQILPSLCCFL 449
           I +      FF    SLCCFL
Sbjct: 185 IYIQEICCRFFTFSSSLCCFL 205


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = -2

Query: 709 LLGHQILTYFLHVLICLSHFSKIIIRSSSGNTKFFELFKSFYYSSLCLS 563
           L+G+ +  Y++ +L+ +     I+      NTK  +L  S+Y ++L +S
Sbjct: 36  LIGNFLNFYYMPLLVVVGSIGNILSVLVFFNTKLKKLSSSYYLAALGIS 84


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 408 QQSRLWLQTLRYKCKKQHR 464
           +Q ++W Q  R K KK+H+
Sbjct: 322 RQIKIWFQNRRMKWKKEHK 340


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 414 SRLWLQTLRYKCKKQ 458
           S +W ++L+++C+KQ
Sbjct: 775 SSIWAESLKFECRKQ 789


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
 Frame = +2

Query: 410 TIAPLAPDVALQMQETAQRRKNLKENSKGNIQYDPTQ-DPVLNEFKRENLIHRQAQAAVV 586
           T+     DV  +     +  +N  E     IQ D  Q +  L E  R+ L   + +   V
Sbjct: 386 TVRRTLQDVQAKQAAIERGMRNASERVT-RIQKDARQIEQDLQERNRDGLSQVEQRKQAV 444

Query: 587 EGLK-KLKE--------LGIATRRPDDYFAEMAKTDEHMQKVRKNLMAKQAAQSRVEK 733
           E  K +LKE        +  A R  D  +  MA   +  ++      AKQ+  +R+EK
Sbjct: 445 ETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERCAKQSETTRIEK 502


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,025
Number of Sequences: 2352
Number of extensions: 12076
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)