Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B09
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629...    31   0.95 
12_02_1139 - 26402332-26402367,26402915-26402953,26403136-264032...    31   1.3  
09_02_0374 - 8112021-8112820,8112908-8113152,8113256-8113455,811...    31   1.7  
02_01_0497 + 3607227-3607462,3607600-3607661,3608138-3608286,360...    28   8.9  

>12_02_0618 -
           21262021-21262117,21262429-21262466,21262933-21262986,
           21263274-21263438,21263523-21263759,21263857-21263918,
           21264543-21264656,21264816-21264942,21266200-21266218,
           21266338-21266428,21266932-21267094,21267182-21267330,
           21268147-21268287,21268368-21268533,21268568-21268631,
           21268729-21269084,21269759-21269977,21270328-21270433,
           21270713-21270942
          Length = 865

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -1

Query: 735 HNFDDTPTLQTIKNWVAKFEETGSTLDK 652
           HNF++TP+ + ++N VA+ + TG+ + K
Sbjct: 136 HNFENTPSTEELENLVAQIQATGADIVK 163


>12_02_1139 -
           26402332-26402367,26402915-26402953,26403136-26403287,
           26403496-26403997,26404260-26404373,26404509-26404736,
           26405375-26405457,26405677-26405824,26406778-26406861
          Length = 461

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
 Frame = -1

Query: 837 SVYRSGPCVLCARVL*NDNSATVARRKFREHKGLHNFDDTPTLQTIKNWVAKFEETGSTL 658
           +V  + P ++C +VL N +   +ARR  R  KGL           ++   A+  +    L
Sbjct: 83  TVVNAVPSIMCDKVLDNLSPVKMARRALRALKGLVRLQALVRGHAVRKQAAETLQCMQAL 142

Query: 657 DKPRLGRPRTSRTEQNIDT-VTQSIRENPTQSTRKRYVAMIEEFFIPELQNFSGFNARTW 481
            + +  R R  R   ++++ VTQ  ++   Q+  + +V  IEE +   + +     A+  
Sbjct: 143 VRAQ-ARVRARRVRISLESQVTQ--KKASEQNVHEDHVWEIEERWCDGIGSAEQMQAKVL 199

Query: 480 FQQDGATSHTSNTAMPVIRQ 421
            +Q+ A       A  +  Q
Sbjct: 200 KRQEAAAKRERAMAYALTHQ 219


>09_02_0374 -
           8112021-8112820,8112908-8113152,8113256-8113455,
           8113584-8114235,8114369-8114661
          Length = 729

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 313 FSLKVAPQKKIHRGQIWTTWRPGNVSSLRD 402
           FS KV  QK     Q+WT W PG+  SL D
Sbjct: 566 FSAKVTSQKDT--SQMWTVWNPGSEFSLCD 593


>02_01_0497 +
           3607227-3607462,3607600-3607661,3608138-3608286,
           3608418-3608538,3608638-3608793,3609041-3609086,
           3609414-3609480,3609553-3609629,3610180-3610249,
           3610956-3611014,3611105-3611213,3611552-3611611,
           3611701-3611763,3612007-3612131,3612260-3612422,
           3612506-3612565,3612802-3612860,3613057-3613138,
           3613227-3613290,3613506-3613573,3613648-3613758
          Length = 668

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 738 LHNFDDTPTLQTIKNWVAKFEETGSTLDKP 649
           L  FDD P L        KFE+ G +LD+P
Sbjct: 587 LEMFDDAPMLLPADEIRKKFEQAGISLDRP 616


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,297,650
Number of Sequences: 37544
Number of extensions: 397954
Number of successful extensions: 945
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)