Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B09
         (906 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    33   0.009
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    31   0.064
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    30   0.084
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    29   0.26 
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    27   0.78 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.4  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 33.5 bits (73), Expect = 0.009
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 489 RTW-FQQDGATSHTSNTAMPVIRQLFPGKVISKRGDISWPPRSPDLTPMDFFLWGYLKAK 313
           R+W F QD  + HTS T    +         +    + WP  SPDL P++  LW   K +
Sbjct: 147 RSWMFMQDNDSKHTSGTVQTWLAD-------NNVKTMKWPALSPDLNPIE-NLWAIFKKR 198

Query: 312 GYDTNPRSIEALKENIRREMTSIXAVT 232
                P  ++ L ++++   + I   T
Sbjct: 199 LGKNIPEDLDHLFDHMQEVWSKIPPET 225


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 30.7 bits (66), Expect = 0.064
 Identities = 27/109 (24%), Positives = 41/109 (37%)
 Frame = -1

Query: 552 YVAMIEEFFIPELQNFSGFNARTWFQQDGATSHTSNTAMPVIRQLFPGKVISKRGDISWP 373
           Y  ++    +P  +   G      FQ D  + HTS T    ++     + +     + WP
Sbjct: 137 YRKILRRKMLPYARQKFGDEEHYIFQHDNDSKHTSRT----VKCYLANQDVQV---LPWP 189

Query: 372 PRSPDLTPMDFFLWGYLKAKGYDTNPRSIEALKENIRREMTSIXAVTCR 226
             SPDL P++  LW  LK    +   RS + L          I    CR
Sbjct: 190 ALSPDLNPIE-NLWSTLKRHVKNQPARSADDLWTRCEAMWKRIDRSECR 237


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 0.084
 Identities = 24/92 (26%), Positives = 39/92 (42%)
 Frame = -1

Query: 552 YVAMIEEFFIPELQNFSGFNARTWFQQDGATSHTSNTAMPVIRQLFPGKVISKRGDISWP 373
           Y  ++    +P  +   G      FQ D  + HTS T    ++     + +     + WP
Sbjct: 209 YRKILSREMLPYARQQFGDEEHYIFQHDNDSKHTSRT----VKCYLANQDVQV---LPWP 261

Query: 372 PRSPDLTPMDFFLWGYLKAKGYDTNPRSIEAL 277
             SPDL P++  LW  LK +  +   RS + L
Sbjct: 262 ALSPDLNPIE-NLWSTLKRQLKNQPARSADDL 292


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 25/94 (26%), Positives = 39/94 (41%)
 Frame = -1

Query: 639 RPRTSRTEQNIDTVTQSIRENPTQSTRKRYVAMIEEFFIPELQNFSGFNARTWFQQDGAT 460
           R R  RTE+ I T  + + E   + T +  +  +E F   EL+          F   G T
Sbjct: 158 RTRVIRTEEYIPTQEELLEE--AEITERENIKSLERFRRMELEKQKIRPTNKKFT--GPT 213

Query: 459 SHTSNTAMPVIRQLFPGKVISKRGDISWPPRSPD 358
               +TAMP+I +++          IS P  + D
Sbjct: 214 IRYFSTAMPIIEEVYDSNTEVDPLSISDPKEAED 247


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -1

Query: 705 TIKNWVAKFEETGSTLDKPRLGRPRTSRTEQNIDT-VTQSIRENPTQSTR 559
           T+   + +++E  +T+ KP+  R R+   +QN+ + + ++I+ NP  S R
Sbjct: 34  TVWRVIKRYKEILTTIRKPQANR-RSGTVDQNLRSKILKTIKGNPNLSDR 82


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -1

Query: 633 RTSRTEQNIDTVTQSIRENPTQSTRKRYVAMIEEFFIPELQNFSGFNARTWFQQDGATSH 454
           +  + + N +   +++REN T S    +  M+ +   PE++     N R+W    GA+SH
Sbjct: 103 KKKKIKPNKEQQVKTVRENDTSS----FTFMVRQ---PEIRG----NDRSWLIDSGASSH 151

Query: 453 --TSNTAMPVIRQ 421
             +  +A  V+ Q
Sbjct: 152 LCSDKSAFTVMEQ 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,129
Number of Sequences: 2352
Number of extensions: 14937
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)