Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B07
         (920 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95JC9 Cluster: Basic proline-rich protein precursor [C...    38   0.36 
UniRef50_Q10L09 Cluster: Uncharacterised protein family containi...    36   1.5  
UniRef50_Q7JP75 Cluster: Cytokinesis defect protein 1, isoform b...    34   4.4  

>UniRef50_Q95JC9 Cluster: Basic proline-rich protein precursor
           [Contains: Proline-rich peptide SP-A (PRP-SP-A);
           Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone
           (PH-Ab)]; n=10; Eukaryota|Rep: Basic proline-rich
           protein precursor [Contains: Proline-rich peptide SP-A
           (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B);
           Parotid hormone (PH-Ab)] - Sus scrofa (Pig)
          Length = 676

 Score = 37.9 bits (84), Expect = 0.36
 Identities = 20/65 (30%), Positives = 22/65 (33%)
 Frame = -2

Query: 658 PXXXGXKKPPPPPPXXXXXXXFFFFXGXKXRKXPKXKKTPXSPXXXXXXXXXXXKXPXPX 479
           P   G + PPPPPP            G K +K P     P  P             P P 
Sbjct: 408 PAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPPPPGPPSPGPAPPGARPPPG 467

Query: 478 PPPXG 464
           PPP G
Sbjct: 468 PPPPG 472


>UniRef50_Q10L09 Cluster: Uncharacterised protein family containing
           protein, expressed; n=8; Oryza sativa|Rep:
           Uncharacterised protein family containing protein,
           expressed - Oryza sativa subsp. japonica (Rice)
          Length = 244

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 23/78 (29%), Positives = 27/78 (34%)
 Frame = -2

Query: 679 GGKKIKXPXXXGXKKPPPPPPXXXXXXXFFFFXGXKXRKXPKXKKTPXSPXXXXXXXXXX 500
           GG + K     G  KPPPPPP              K +K P  +    +           
Sbjct: 35  GGGRRKKAGRRGEAKPPPPPPPQLRGGE------TKKKKKPDARTAAEAAQGLQRHEVER 88

Query: 499 XKXPXPXPPPXGGXKKKR 446
            K P P PPP    K KR
Sbjct: 89  RKKPPPPPPPPKQEKAKR 106


>UniRef50_Q7JP75 Cluster: Cytokinesis defect protein 1, isoform b;
           n=6; cellular organisms|Rep: Cytokinesis defect protein
           1, isoform b - Caenorhabditis elegans
          Length = 1437

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -3

Query: 702 GXXPPXXGGEKK*XPPXXGXXKNPPPPPP 616
           G  PP  GG     PP  G    PPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPP 777


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,216,140
Number of Sequences: 1657284
Number of extensions: 5995593
Number of successful extensions: 66109
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36082
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)