Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B06
         (866 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3605|AAF47005.2|  459|Drosophila melanogaster CG5357-PA...    29   6.3  
AY061272-1|AAL28820.1|  707|Drosophila melanogaster LD19634p pro...    29   8.3  
AE014296-2322|AAF49789.1|  952|Drosophila melanogaster CG8833-PA...    29   8.3  

>AE013599-3605|AAF47005.2|  459|Drosophila melanogaster CG5357-PA
           protein.
          Length = 459

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 244 TTNALSSQSVGSGGSAKRKTALNKNQIP 327
           +TN+ SS  +GSGG   R T +   Q+P
Sbjct: 80  STNSSSSSGIGSGGGTTRLTLIPPTQLP 107


>AY061272-1|AAL28820.1|  707|Drosophila melanogaster LD19634p
           protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = +3

Query: 102 SQIAEEQKL---EESDGLPPASSSSIAAQEKPREELPTRAL 215
           ++++E+ KL   +ES GLP  S++S AAQ   R   P R +
Sbjct: 486 TELSEQDKLAILQESFGLPVTSTTSAAAQNVLRNTSPPRGI 526


>AE014296-2322|AAF49789.1|  952|Drosophila melanogaster CG8833-PA
           protein.
          Length = 952

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = +3

Query: 102 SQIAEEQKL---EESDGLPPASSSSIAAQEKPREELPTRAL 215
           ++++E+ KL   +ES GLP  S++S AAQ   R   P R +
Sbjct: 731 TELSEQDKLAILQESFGLPVTSTTSAAAQNVLRNTSPPRGI 771


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,569,032
Number of Sequences: 53049
Number of extensions: 530231
Number of successful extensions: 1590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)