Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_B04
         (978 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro...    25   1.7  
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro...    25   1.7  
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB...    25   1.7  
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA...    25   1.7  

>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
           protein protein.
          Length = 1091

 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +1

Query: 727 PPPXXGGGXXXKXXXFFXXXXXXFFFXPPPXXXXXXFXXXGGXXXXPXXXXXXXXPGGPP 906
           PPP  GGG                   PPP          GG    P         GGPP
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGG---GPPPPPPPPMPGRAGGPPPPPPPPGM----GGPP 567

Query: 907 PPP 915
           PPP
Sbjct: 568 PPP 570



 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 892 PGGPPPPPP 918
           PGG PPPPP
Sbjct: 577 PGGGPPPPP 585


>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
           protein.
          Length = 1091

 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +1

Query: 727 PPPXXGGGXXXKXXXFFXXXXXXFFFXPPPXXXXXXFXXXGGXXXXPXXXXXXXXPGGPP 906
           PPP  GGG                   PPP          GG    P         GGPP
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGG---GPPPPPPPPMPGRAGGPPPPPPPPGM----GGPP 567

Query: 907 PPP 915
           PPP
Sbjct: 568 PPP 570



 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 892 PGGPPPPPP 918
           PGG PPPPP
Sbjct: 577 PGGGPPPPP 585


>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
           isoform B protein.
          Length = 1091

 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +1

Query: 727 PPPXXGGGXXXKXXXFFXXXXXXFFFXPPPXXXXXXFXXXGGXXXXPXXXXXXXXPGGPP 906
           PPP  GGG                   PPP          GG    P         GGPP
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGG---GPPPPPPPPMPGRAGGPPPPPPPPGM----GGPP 567

Query: 907 PPP 915
           PPP
Sbjct: 568 PPP 570



 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 892 PGGPPPPPP 918
           PGG PPPPP
Sbjct: 577 PGGGPPPPP 585


>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
           isoform A protein.
          Length = 1091

 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +1

Query: 727 PPPXXGGGXXXKXXXFFXXXXXXFFFXPPPXXXXXXFXXXGGXXXXPXXXXXXXXPGGPP 906
           PPP  GGG                   PPP          GG    P         GGPP
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGG---GPPPPPPPPMPGRAGGPPPPPPPPGM----GGPP 567

Query: 907 PPP 915
           PPP
Sbjct: 568 PPP 570



 Score = 25.0 bits (52), Expect(2) = 1.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 892 PGGPPPPPP 918
           PGG PPPPP
Sbjct: 577 PGGGPPPPP 585


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,116,552
Number of Sequences: 53049
Number of extensions: 658417
Number of successful extensions: 3210
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2769
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4915008720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)