Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A24
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 130 1e-30
09_06_0213 - 21610887-21611198 130 1e-30
09_04_0227 + 15861410-15861721 130 1e-30
07_03_0825 + 21773710-21774021 130 1e-30
05_05_0150 + 22758060-22758371 130 1e-30
05_05_0128 - 22591720-22592031 130 1e-30
04_04_0926 - 29462363-29462674 130 1e-30
03_01_0134 + 1060551-1060862 130 1e-30
02_05_0333 - 28012829-28013140 130 1e-30
01_06_1262 + 35833882-35834193 130 1e-30
05_05_0130 - 22598744-22599043,22599296-22599307 110 1e-24
01_02_0078 - 10894871-10895841,10897268-10898426 29 6.6
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 28 8.7
>10_08_0780 - 20500344-20500655
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>09_06_0213 - 21610887-21611198
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>09_04_0227 + 15861410-15861721
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>07_03_0825 + 21773710-21774021
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>05_05_0150 + 22758060-22758371
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>05_05_0128 - 22591720-22592031
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>04_04_0926 - 29462363-29462674
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>03_01_0134 + 1060551-1060862
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>02_05_0333 - 28012829-28013140
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>01_06_1262 + 35833882-35834193
Length = 103
Score = 130 bits (314), Expect = 1e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
ITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY 89
Query: 408 ALKRQG 425
ALKRQG
Sbjct: 90 ALKRQG 95
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 110 bits (265), Expect = 1e-24
Identities = 53/66 (80%), Positives = 59/66 (89%)
Frame = +3
Query: 228 ITKPAIRRLARRGGVKRISGLIYEETRXVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 407
I KP IRRLAR+GGVKRISGLIY+ETR VL++FL+NVI DA+TYTEHA RKTV AMDVVY
Sbjct: 30 IAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHAHRKTVMAMDVVY 89
Query: 408 ALKRQG 425
ALK QG
Sbjct: 90 ALKLQG 95
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 302 DPXRSQSVPRKRDPRRCH--IHRTRQEEDRHRYGCCVRSETPRSHPXTVSAV 451
+P + PR+R RR H I R R+ + RH G VR + + V AV
Sbjct: 559 EPSALTAAPRRRQIRRVHVRIRRARRCQARHAVGELVRRQARHAVGEIVRAV 610
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 338 DPRRCHIHRTRQEEDR---HRYGCCVRSETPRS 427
D R H+H+ R E H+ CCV +TPRS
Sbjct: 2 DLLRSHLHKVRIPEPGSRIHKDECCVSFDTPRS 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,772,140
Number of Sequences: 37544
Number of extensions: 276220
Number of successful extensions: 687
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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