BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A23
(1148 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 46 5e-05
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 46 5e-05
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.22
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 0.30
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 0.30
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 30 3.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 8.2
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 8.2
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 8.2
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 46.0 bits (104), Expect = 5e-05
Identities = 25/59 (42%), Positives = 26/59 (44%)
Frame = -1
Query: 470 PPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXFPPPP 294
PPP F +G PPPP F PP G PPP M GG F FPPPP
Sbjct: 307 PPPHFMGRGMPPPFMPPPPHFG----MGPPRGFMPPPHPMMFRGGPYPPF----FPPPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 46.0 bits (104), Expect = 5e-05
Identities = 25/59 (42%), Positives = 26/59 (44%)
Frame = -1
Query: 470 PPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXFPPPP 294
PPP F +G PPPP F PP G PPP M GG F FPPPP
Sbjct: 307 PPPHFMGRGMPPPFMPPPPHFG----MGPPRGFMPPPHPMMFRGGPYPPF----FPPPP 357
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.22
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Frame = -1
Query: 470 PPPXFXKK--GGXXXLXPP---PPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXF 306
PPP GG PP PP PP G PPP GG F GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPP 785
Query: 305 PPPP 294
PPPP
Sbjct: 786 PPPP 789
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 387 PPPGGXXPPXKXXGPXGXKXXFXGGXFPPXP 295
PPPGG PP P G F GG PP P
Sbjct: 763 PPPGGCPPPPPPPPPGG----FKGGPPPPPP 789
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 647 PXPPPXGGGXPP 682
P PPP GG PP
Sbjct: 742 PPPPPPPGGLPP 753
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 11/38 (28%), Positives = 11/38 (28%)
Frame = +2
Query: 656 PPXGGGXPPPXXXXXXXXXXXXXXXXXXXXXXXPPXPP 769
PP GG PPP PP PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.22
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Frame = -1
Query: 470 PPPXFXKK--GGXXXLXPP---PPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXF 306
PPP GG PP PP PP G PPP GG F GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPP 785
Query: 305 PPPP 294
PPPP
Sbjct: 786 PPPP 789
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 387 PPPGGXXPPXKXXGPXGXKXXFXGGXFPPXP 295
PPPGG PP P G F GG PP P
Sbjct: 763 PPPGGCPPPPPPPPPGG----FKGGPPPPPP 789
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 647 PXPPPXGGGXPP 682
P PPP GG PP
Sbjct: 742 PPPPPPPGGLPP 753
Score = 23.8 bits (49), Expect(2) = 4.9
Identities = 11/38 (28%), Positives = 11/38 (28%)
Frame = +2
Query: 656 PPXGGGXPPPXXXXXXXXXXXXXXXXXXXXXXXPPXPP 769
PP GG PPP PP PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.22
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Frame = -1
Query: 470 PPPXFXKK--GGXXXLXPP---PPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXF 306
PPP GG PP PP PP G PPP GG F GG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG----FKGGPP 368
Query: 305 PPPP 294
PPPP
Sbjct: 369 PPPP 372
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 387 PPPGGXXPPXKXXGPXGXKXXFXGGXFPPXP 295
PPPGG PP P G F GG PP P
Sbjct: 346 PPPGGCPPPPPPPPPGG----FKGGPPPPPP 372
Score = 23.8 bits (49), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 647 PXPPPXGGGXPP 682
P PPP GG PP
Sbjct: 325 PPPPPPPGGLPP 336
Score = 23.8 bits (49), Expect(2) = 5.1
Identities = 11/38 (28%), Positives = 11/38 (28%)
Frame = +2
Query: 656 PPXGGGXPPPXXXXXXXXXXXXXXXXXXXXXXXPPXPP 769
PP GG PPP PP PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.6 bits (56), Expect(2) = 0.30
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 931 PPPPPPPP 954
PPPPPPPP
Sbjct: 609 PPPPPPPP 616
Score = 26.6 bits (56), Expect(2) = 4.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 931 PPPPPPPP 954
PPPPPPPP
Sbjct: 610 PPPPPPPP 617
Score = 25.4 bits (53), Expect(2) = 0.30
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 934 PPPPPPPXXXXXXXXGGG 987
PPPPPPP G G
Sbjct: 630 PPPPPPPPPMGLPAVGAG 647
Score = 21.4 bits (43), Expect(2) = 4.0
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 937 PPPPPPXXXXXXXXGGGG 990
PPPPPP G G
Sbjct: 630 PPPPPPPPPMGLPAVGAG 647
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.6 bits (56), Expect(2) = 0.30
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 931 PPPPPPPP 954
PPPPPPPP
Sbjct: 435 PPPPPPPP 442
Score = 26.6 bits (56), Expect(2) = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 931 PPPPPPPP 954
PPPPPPPP
Sbjct: 436 PPPPPPPP 443
Score = 25.4 bits (53), Expect(2) = 0.30
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 934 PPPPPPPXXXXXXXXGGG 987
PPPPPPP G G
Sbjct: 456 PPPPPPPPPMGLPAVGAG 473
Score = 21.4 bits (43), Expect(2) = 4.1
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 937 PPPPPPXXXXXXXXGGGG 990
PPPPPP G G
Sbjct: 456 PPPPPPPPPMGLPAVGAG 473
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = -1
Query: 482 FXXXPPPXFXKKGGXXXLXPPPPX------FXKKKKXXPPXGXXPPPKKXMAXGGXKXXF 321
F PP F PPPP F + PP PPP A G
Sbjct: 348 FGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGG-- 405
Query: 320 XGGXFPPPP 294
GG PPPP
Sbjct: 406 PGGYGPPPP 414
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = -1
Query: 470 PPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXFPPPP 294
PPP G PPPP + PP PPP+ M G G PPPP
Sbjct: 1560 PPPHGGMNGWRGG--PPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG---PPPP 1613
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(2) = 1.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 931 PPPPPPPP 954
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 937 PPPPPPXXXXXXXXGG 984
PPPPPP GG
Sbjct: 327 PPPPPPSRFGPPGMGG 342
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 931 PPPPPPPP 954
PPPPPPPP
Sbjct: 297 PPPPPPPP 304
Score = 22.6 bits (46), Expect(2) = 2.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 937 PPPPPPXXXXXXXXGG 984
PPPPPP GG
Sbjct: 317 PPPPPPSRFGPPGMGG 332
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 992 PPPPPXXXXXXXXGGGGGGGG 930
P PPP GGGGGGGG
Sbjct: 721 PVPPPVAPAVAFAGGGGGGGG 741
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 992 PPPPPXXXXXXXXGGGGGGGG 930
PPPPP GGGGG GG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGG 74
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 992 PPPPPXXXXXXXXGGGGGGGG 930
PPPPP GGGG GGG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGG 75
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 992 PPPPPXXXXXXXXGGGGGGGG 930
PPPPP GGGGG GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGG 131
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 992 PPPPPXXXXXXXXGGGGGGGG 930
PPPPP GGGG GGG
Sbjct: 112 PPPPPACGGGCGGGGGGCGGG 132
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 931 PPPPPPPPXXXXXXXXGGGGG 993
PPPPPPPP GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 931 PPPPPPPPXXXXXXXXGGGGG 993
PPPPPPPP GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGG 322
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 931 PPPPPPPPXXXXXXXXGGGGG 993
PPPPPPPP GGG
Sbjct: 534 PPPPPPPPRSSGANGNRNGGG 554
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 931 PPPPPPPPXXXXXXXXGGGGG 993
PPPPPPP GGGG
Sbjct: 535 PPPPPPPRSSGANGNRNGGGG 555
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 482 FXXXPPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPP 363
F PPP + G PPPP + + PP G PP
Sbjct: 21 FERPPPPDWFFPGPLRPWGPPPP--WHRNRGPPPFGPPPP 58
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 575 PPPPFXXFXKKKXXXXXGXXXXXXPXPPPXGGGXPPP 685
PPPP P PPP GG PPP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 470 PPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXFPPPP 294
PPP PPPP PP G P G G PPPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 575 PPPPFXXFXKKKXXXXXGXXXXXXPXPPPXGGGXPPP 685
PPPP P PPP GG PPP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 470 PPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXFPPPP 294
PPP PPPP PP G P G G PPPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 575 PPPPFXXFXKKKXXXXXGXXXXXXPXPPPXGGGXPPP 685
PPPP P PPP GG PPP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 470 PPPXFXKKGGXXXLXPPPPXFXKKKKXXPPXGXXPPPKKXMAXGGXKXXFXGGXFPPPP 294
PPP PPPP PP G P G G PPPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 986 PPPXXXXXXXXGGGGGGGG 930
PPP GGGGGGGG
Sbjct: 43 PPPGTSVYMGAGGGGGGGG 61
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 931 PPPPP----PPPXXXXXXXXGGGGG 993
PPPPP PPP GGGGG
Sbjct: 1322 PPPPPMIRGPPPDQMYRDRSGGGGG 1346
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 931 PPPPP----PPPXXXXXXXXGGGGG 993
PPPPP PPP GGGGG
Sbjct: 1322 PPPPPMIRGPPPDQMYRDRSGGGGG 1346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,364,978
Number of Sequences: 27780
Number of extensions: 392199
Number of successful extensions: 7053
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2367
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3119902942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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