Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_A22
         (933 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.0  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   9.2  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   9.2  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   9.2  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   9.2  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   9.2  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   9.2  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   9.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   9.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   9.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   9.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   9.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   9.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   9.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   9.2  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   9.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   9.2  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +2

Query: 803 GGPXPRPXKXXPPXXPPRXXPXXP 874
           G P P+P     P  P R  P  P
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNP 42



 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 806 GPXPRPXKXXPPXXPPRXXP 865
           G  P P +  PP  PP   P
Sbjct: 37  GSPPNPSQGPPPGGPPGAPP 56


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPR 147


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 375 PFPPRFIPPDMYRLRPPPNPR 395


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 360 PFPPRFIPPDMYRLRPPPNPR 380


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 840 PXPPQEXPPXXPXLXPTPXXR 902
           P PP+  PP    L P P  R
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPR 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.310    0.145    0.476 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,045
Number of Sequences: 438
Number of extensions: 3163
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)