Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_A21
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    29   0.077
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    29   0.077
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    29   0.077
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.077
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 450 YSITSAGPPFRKTGKSLSLWKSS 382
           Y +T  GPP  +TG +L +W+++
Sbjct: 15  YDMTGCGPPEEETGSNLPVWEAA 37


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.077
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 450 YSITSAGPPFRKTGKSLSLWKSS 382
           Y +T  GPP  +TG +L +W+++
Sbjct: 15  YDMTGCGPPEEETGSNLPVWEAA 37


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.077
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 450 YSITSAGPPFRKTGKSLSLWKSS 382
           Y +T  GPP  +TG +L +W+++
Sbjct: 15  YDMTGCGPPEEETGSNLPVWEAA 37


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 296 ACAAPGKRNLMPGTNTPYPPVP 361
           A  +P    L P    P PP+P
Sbjct: 400 AVRSPAGGQLPPSAGAPMPPIP 421


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 308 PGKRNLMPGTNTPYPP 355
           PG R ++P  N  +PP
Sbjct: 49  PGLRQVLPNGNLVFPP 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,522
Number of Sequences: 438
Number of extensions: 3519
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)