Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A16
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 313 5e-85
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 311 2e-84
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 311 2e-84
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 311 2e-84
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 311 2e-84
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 309 8e-84
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 307 3e-83
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 187 4e-47
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 91 4e-18
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 313 bits (769), Expect = 5e-85
Identities = 154/257 (59%), Positives = 184/257 (71%), Gaps = 6/257 (2%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 611 PGYDAESKKFNAEVHRGSHLW------FACC*IHEKS*TG**GFFQETXSKYIKLGVTAD 772
PGYD+ESK+FNAEVHR H+ + C + E +++ S+YIK VT D
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRCLMEEDE-----DAYKKQFSQYIKNSVTPD 234
Query: 773 AIEAIYXKAMXHRADHP 823
+E +Y KA ++P
Sbjct: 235 MMEEMYKKAHAAIRENP 251
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 311 bits (764), Expect = 2e-84
Identities = 151/251 (60%), Positives = 179/251 (71%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 611 PGYDAESKKFNAEVHRGSHLWFACC*IHEKS*TG**GFFQETXSKYIKLGVTADAIEAIY 790
PGYD+ESK+FNAEVHR + +++ S+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 791 XKAMXHRADHP 823
KA ++P
Sbjct: 241 KKAHAAIRENP 251
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKK 221
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 311 bits (764), Expect = 2e-84
Identities = 151/251 (60%), Positives = 179/251 (71%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 611 PGYDAESKKFNAEVHRGSHLWFACC*IHEKS*TG**GFFQETXSKYIKLGVTADAIEAIY 790
PGYD+ESK+FNAEVHR + +++ S+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 791 XKAMXHRADHP 823
KA ++P
Sbjct: 241 KKAHAAIRENP 251
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKK 221
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 311 bits (764), Expect = 2e-84
Identities = 151/251 (60%), Positives = 179/251 (71%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 611 PGYDAESKKFNAEVHRGSHLWFACC*IHEKS*TG**GFFQETXSKYIKLGVTADAIEAIY 790
PGYD+ESK+FNAEVHR + +++ S+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 791 XKAMXHRADHP 823
KA ++P
Sbjct: 241 KKAHAAIRENP 251
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKK 221
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 311 bits (764), Expect = 2e-84
Identities = 151/251 (60%), Positives = 179/251 (71%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 611 PGYDAESKKFNAEVHRGSHLWFACC*IHEKS*TG**GFFQETXSKYIKLGVTADAIEAIY 790
PGYD+ESK+FNAEVHR + +++ S+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 791 XKAMXHRADHP 823
KA ++P
Sbjct: 241 KKAHAAIRENP 251
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKK 221
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 309 bits (759), Expect = 8e-84
Identities = 150/251 (59%), Positives = 178/251 (70%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 611 PGYDAESKKFNAEVHRGSHLWFACC*IHEKS*TG**GFFQETXSKYIKLGVTADAIEAIY 790
PGYD+ESK+FNAEVHR + +++ S+YIK VT D +E +Y
Sbjct: 181 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMY 240
Query: 791 XKAMXHRADHP 823
KA ++P
Sbjct: 241 KKAHAAIRENP 251
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKK 221
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 307 bits (754), Expect = 3e-83
Identities = 151/251 (60%), Positives = 179/251 (71%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 430
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 431 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 610
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Query: 611 PGYDAESKKFNAEVHRGSHLWFACC*IHEKS*TG**GFFQETXSKYIKLGVTADAIEAIY 790
PGYD+ESK+FNAEVHR + +++ S+YIK VT D +E +Y
Sbjct: 188 PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMY 246
Query: 791 XKAMXHRADHP 823
KA ++P
Sbjct: 247 KKAHAAIRENP 257
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 205 HIMGQNVADYMRYLMEEDEDAYKK 228
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 187 bits (456), Expect = 4e-47
Identities = 82/98 (83%), Positives = 94/98 (95%)
Frame = +2
Query: 71 MGFVKVVXHKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 250
MGFVKVV +K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 251 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 364
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 221 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 400
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 401 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 580
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 581 LNVPH 595
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 91.5 bits (217), Expect = 4e-18
Identities = 48/99 (48%), Positives = 63/99 (63%)
Frame = +2
Query: 527 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRGSHLWFACC*IHEKS* 706
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR +
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 707 TG**GFFQETXSKYIKLGVTADAIEAIYXKAMXHRADHP 823
+++ S+YIK VT D +E +Y KA ++P
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 99
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 663 HIFGLHVAEYMRSLEQDDEDSFKR 734
HI G +VA+YMR L ++DED++K+
Sbjct: 46 HIMGQNVADYMRYLMEEDEDAYKK 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,116,828
Number of Sequences: 237096
Number of extensions: 2418593
Number of successful extensions: 4282
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4272
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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