Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A10
(858 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 244 1e-65
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 125 7e-30
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 124 1e-29
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 123 4e-29
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 113 2e-26
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 102 7e-23
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 99 9e-22
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 57 3e-09
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 40 5e-04
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 39 8e-04
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 28 2.0
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 27 3.4
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 27 3.4
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 4.5
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 6.0
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 26 7.9
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 244 bits (597), Expect = 1e-65
Identities = 111/172 (64%), Positives = 140/172 (81%)
Frame = +2
Query: 227 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 406
YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+ T + VVL VEKR+TS LME ++EK+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKL 67
Query: 407 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 586
E+D HI CA+SGL AD+RT++E ARV+ QNH F Y+E +ES Q++ +LA++FG+ +
Sbjct: 68 FEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGE 127
Query: 587 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQ 742
D MSRPFGVA++ AGIDE GPQL+H +PSGT+ +Y+AKAIGSGSE A+
Sbjct: 128 DGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAK 179
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 741 SRVEGDYHKSMTLKEAIKSALTILKQVMEEKLSENNVEV 857
S + ++HK MTL+EA L +L+QVMEEKL NV++
Sbjct: 180 SELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQL 218
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 125 bits (302), Expect = 7e-30
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
Frame = +2
Query: 227 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 406
Y + TFSP G+L Q+EYA+ A+ G T++GI ++GVVLA EK+ TS L ++EK+
Sbjct: 5 YAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKV 64
Query: 407 VEVDRHIACAVSGLMADSRTLVERARVECQNHW-FVYNERMSVESCAQAVSNLAIQFGDS 583
+ I SG+ D R LV+++R Q + +YNE + Q ++++ +S
Sbjct: 65 CAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASV---MQES 121
Query: 584 DDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQ 742
G RPFGV+++ AG+DEKGP L+ +DPSGT+ + A AIG S A+
Sbjct: 122 TQSGGV---RPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAK 171
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 124 bits (300), Expect = 1e-29
Identities = 65/175 (37%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Frame = +2
Query: 227 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 406
YDR ++ FSP+GRL QVEY EA++ G+TAI + +E +V+ VE++ L + +KI
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 407 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 586
VD H+ A +GL AD+R L+++ARVE QNH + +S+E + V+ + ++ S
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQS- 122
Query: 587 DDSGTAMSRPFGVAVMFAGID--EKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 745
G RPFGV+ + AG D + P+++ +P+G + + A AIG S+ A++
Sbjct: 123 --GGV---RPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAARE 172
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 123 bits (296), Expect = 4e-29
Identities = 69/174 (39%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Frame = +2
Query: 227 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME-PTTIEK 403
YD FSPEGRL+QVEYA+EAI A+GI +G+VLA EK++TS L+E + EK
Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEK 64
Query: 404 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 583
+ + ++ CAV+GL AD+ L+ AR Q + +NE M E + V +L +
Sbjct: 65 LYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY--- 121
Query: 584 DDDSGTAMSRPFGVAVMFAGIDE-KGPQLFHMDPSGTFVQYDAKAIGSGSEGAQ 742
+ RPFGV+ ++AG D +G QLF +PSG + + A +IG S Q
Sbjct: 122 ---TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQ 172
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 113 bits (273), Expect = 2e-26
Identities = 66/179 (36%), Positives = 99/179 (55%)
Frame = +2
Query: 227 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 406
YD G+ FSP+GRLFQ EYA +A++ ST IGI +GV+LA+EK +TS L++P +I
Sbjct: 8 YDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRI 66
Query: 407 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 586
VDRHI A +G + D + +V+RAR E + Y + A + N F
Sbjct: 67 GSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---- 122
Query: 587 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQS*RRLS 763
+ + RPFGV A D +GP L+ ++P+G + Y+ A G G + A+ +L+
Sbjct: 123 --TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLN 179
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 102 bits (244), Expect = 7e-23
Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Frame = +2
Query: 212 SHVPXYDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGICTSEGVVLAVEKRITSTLMEP 388
S +DR + FSPEGRL+QVEYA +A G T++G+ + +K++ L++
Sbjct: 2 SQARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDA 61
Query: 389 TTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAI 568
+T++ + + + I C ++G +AD+R V RAR E + M + A+ ++N+A
Sbjct: 62 STVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIA- 120
Query: 569 QFGDSDDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIG 721
+ A RP GVA+ +D++ GP LF +DP+G ++ Y A + G
Sbjct: 121 -----QVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAG 167
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 98.7 bits (235), Expect = 9e-22
Identities = 58/172 (33%), Positives = 91/172 (52%)
Frame = +2
Query: 227 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 406
YD T+SP+GRL QVEYA+EAIK GS +G+ + VL KR L + +K+
Sbjct: 6 YDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL--SSYQKKL 63
Query: 407 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 586
+ +D HI A++GL D+R L + E + ++ + V + +S +A + +
Sbjct: 64 IRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVR---RLMSKVAEKAQINT 120
Query: 587 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQ 742
+ G RP+GV + G DE GP L PSG ++Y ++GS S+ A+
Sbjct: 121 QEYG---RRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSAR 169
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 57.2 bits (132), Expect = 3e-09
Identities = 36/143 (25%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 305 GSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERA 481
G+T + G+V+ V+ R ++ L+ T++K++E++ ++ ++G AD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 482 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP 661
+EC+ H E +SV + ++ +SN+ + G +S + M AG + G
Sbjct: 121 GMECRLHQLRNKELISVSAASKILSNITYSY------KGYGLS----MGTMLAGTGKGGT 170
Query: 662 QLFHMDPSGTFVQYDAKAIGSGS 730
L+++D GT ++ D ++GSGS
Sbjct: 171 ALYYIDSDGTRLKGDLFSVGSGS 193
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 39.9 bits (89), Expect = 5e-04
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 1/151 (0%)
Frame = +2
Query: 290 EAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRT 466
+A G+T +G+ + +VL + R T+ ++ +K+ + +I CA +G AD+
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 467 LVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGI 646
+ + H N + V + + ++ G ++ G
Sbjct: 90 VTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRY-----------QGHIGAYLVLGGY 138
Query: 647 DEKGPQLFHMDPSGTFVQYDAKAIGSGSEGA 739
D KGP LF + G+ + A+GSGS A
Sbjct: 139 DCKGPHLFTIAAHGSSDKLPYVALGSGSLAA 169
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 39.1 bits (87), Expect = 8e-04
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 296 IKLGSTAIGICTSEGVVLAVEKRIT-STLMEPTTIEKIVEVDRHIACAVSGLMADSRTLV 472
I++G+T + +GV+LA + R T + +K+ ++ +I C SG AD++T+
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVA 80
Query: 473 ERARVECQNHWFVYNERMSVESCAQAVSNLAIQ 571
+ + + + SV + A S + Q
Sbjct: 81 DLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQ 113
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 27.9 bits (59), Expect = 2.0
Identities = 26/92 (28%), Positives = 35/92 (38%)
Frame = +2
Query: 572 FGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQS* 751
FG S T S G AV + G +D S D+ A+ S S A +
Sbjct: 299 FGASVSPKSTPGSNSTGAAVDTNSVHSNGGS--DLDYSSYLT--DSSAVDSPSLDADEVL 354
Query: 752 RRLS*VNDPQRGHQVCTHHTEAGHGGKALGEQ 847
R + NDP T + G G + LG+Q
Sbjct: 355 RSFNLANDPIGAVDPLTLEIDQGSGSQLLGQQ 386
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 342 TPSEV--QMPIAVEPSLIASMAYSTWNSLPSGLNVLTPRSXLGTCEKHFTIXGT 187
TPS V ++PI + S +A+ + + P+ + LT + L CE + + T
Sbjct: 182 TPSNVIRELPIVIHNSHLATCLLHSLSEPPTPASTLTAEAALEDCESNLPLTET 235
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -3
Query: 799 ADLMASLRVIDL**SPSTLLGTFTARTNGLGIILHKCTTRVH---MKQLRXFLINACKHN 629
A+L S+ DL + L+G + T LG L++ ++ + L H
Sbjct: 85 ANLWESVTDYDLQHANEPLVGNYYISTEALGDGLNRSPFTINPEKRRSLSDISYVPIPHK 144
Query: 628 SNTKWP*HGCSTIIVTVS 575
++ WP H S IVT S
Sbjct: 145 EHSNWPVHCSSQAIVTTS 162
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.6 bits (56), Expect = 4.5
Identities = 25/81 (30%), Positives = 31/81 (38%)
Frame = -3
Query: 505 PVVLTFNSGPFN*GPGVGHQTRNGASDVSIYFNNLFDGRGFHQS*SYPLLHGQNNSLRST 326
P+ L F S F G S +S YF NLF + Y LL G+NN+ +
Sbjct: 148 PLTLRFKS-IFQSGVATQDLDVQWVSSISWYFLNLFGLKSV-----YALLLGENNAASNA 201
Query: 325 NANCSGAKFDSFYGIFHLEQP 263
A F S L QP
Sbjct: 202 TNEMGMAGFSSAAATAQLIQP 222
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 639 ANITATPNGRDMAVPLSSSLS-PNCIAKLETA 547
+ +TATP+ + PLSS S PN I+ L T+
Sbjct: 345 STLTATPSSLENLYPLSSRRSVPNLISSLGTS 376
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 509 QTSGSDIQLGPFQLRSWSRPSDPKRRKRCV 420
+T+ D++ PF L +W P+DPK K +
Sbjct: 12 ETAEIDVKEDPF-LVTWQSPTDPKNPKNWI 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,462,959
Number of Sequences: 5004
Number of extensions: 72669
Number of successful extensions: 209
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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