Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_A10
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   2.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   3.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.6  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   6.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   8.3  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = -2

Query: 689 YHSGPY---ETVEXLSHQCLQT*QQHQMAVTWLFHYHRHCLQTV*LSW 555
           Y++ PY    T    S QC  T  Q    ++WLF      L +V L W
Sbjct: 215 YYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLRW 262


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -1

Query: 360 FSTAKTTPSEVQMPIAVEPSLIASMAYSTWNSLPSGLN 247
           + T +T   +V+  +A   S I       WN +P G N
Sbjct: 41  YQTLQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGAN 78


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 452  PSDPKRRKRCVDLLQQSFRWSW 387
            PS P    RC  L  QS + SW
Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSW 1132


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 452  PSDPKRRKRCVDLLQQSFRWSW 387
            PS P    RC  L  QS + SW
Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSW 1128


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 532 YTHTLIVHKPVVLTFNSGPFN*GPGVGHQTR 440
           YT++L   KPV+   + G F  G    H+ R
Sbjct: 10  YTNSLDQSKPVMFYVHEGAFISGTSSFHEMR 40


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 467 RSWSRPSDP 441
           RSWSRP +P
Sbjct: 166 RSWSRPREP 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,584
Number of Sequences: 438
Number of extensions: 5196
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)