Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_A09
         (893 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   7.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 573 FDGGKDQPVDKIETDITSQSKLPPL 647
           + G  D  +D+++TD   +  +PPL
Sbjct: 111 YSGNSDPSMDQVKTDKPRELYIPPL 135


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 561 NYCDTFLSLERSSLGKTY 508
           +YCDT+L+ +  S+ KT+
Sbjct: 7   DYCDTYLTHDSPSVRKTH 24


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 43   FEISINVRKVNSKRGDHIIRC-CGLMQKNRFLLENVAWLHIDCNEI 177
            +++S N   V     +++  C CG + K R  L++ A   +D NEI
Sbjct: 941  WQLSANPYLVEIALANNLWTCDCGFVNKLRSYLQSNADKIVDANEI 986


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,236
Number of Sequences: 2352
Number of extensions: 17243
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)