Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A09
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC115373-1|AAI15374.1| 554|Homo sapiens transmembrane protein 8... 41 0.007
AK027587-1|BAB55214.1| 555|Homo sapiens protein ( Homo sapiens ... 40 0.012
AC093675-2|AAY24214.1| 526|Homo sapiens unknown protein. 40 0.012
BC069240-1|AAH69240.1| 494|Homo sapiens TMEM87A protein protein. 31 4.3
AK075403-1|BAC11598.1| 564|Homo sapiens protein ( Homo sapiens ... 31 4.3
AK074870-1|BAC11256.1| 555|Homo sapiens protein ( Homo sapiens ... 31 4.3
AF132733-1|AAF66444.1| 555|Homo sapiens unknown protein. 31 4.3
BC005335-1|AAH05335.1| 181|Homo sapiens TMEM87A protein protein. 31 7.5
>BC115373-1|AAI15374.1| 554|Homo sapiens transmembrane protein 87B
protein.
Length = 554
Score = 40.7 bits (91), Expect = 0.007
Identities = 34/186 (18%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Frame = +3
Query: 270 DVGKWDLELSGDDCHFTLAKSLFKNTKLIIAM---HCDAAVPLNITYDWTPEMCSPEYLH 440
++G W ++ K++F +T + +++ HC V I + C E+ +
Sbjct: 45 ELGLWLETVNDKSGPLIFRKTMFNSTDIKLSVKSFHCSGPVKFTIVWHLKYHTCHNEHSN 104
Query: 441 Y---FEQRIVTCTDRLERTTRDVNASRSYQAMSVQETRTCHSNSSLVFDGGKDQPVDKIE 611
F++ ++ + ++ N + E C+S+S VF ++ + I
Sbjct: 105 LEELFQKHKLSVDEDFCHYLKNDNCWTTKN-----ENLDCNSDSQ-VFPSLNNKELINIR 158
Query: 612 TDITSQSKLPPLLIVEKEGVYVLQMRVRSXQKFKAF---VRIEMVAPSGYLAAAIWPLLP 782
++++Q + + +K+G ++ + +++ ++ V + M+ P GY++A+ WPL+
Sbjct: 159 -NVSNQERSDVVARTQKDGFHIFIVSIKTENTDASWNLNVSLSMIGPHGYISASDWPLMI 217
Query: 783 FFGTXC 800
F+ C
Sbjct: 218 FYMVMC 223
>AK027587-1|BAB55214.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ14681 fis, clone NT2RP2004270, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 555
Score = 39.9 bits (89), Expect = 0.012
Identities = 33/186 (17%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Frame = +3
Query: 270 DVGKWDLELSGDDCHFTLAKSLFKNTKLIIAM---HCDAAVPLNITYDWTPEMCSPEYLH 440
++G W ++ K++F +T + +++ HC V I + C E+ +
Sbjct: 45 ELGLWLETVNDKSGPLIFRKTMFNSTDIKLSVKSFHCSGPVKFTIVWHLKYHTCHNEHSN 104
Query: 441 Y---FEQRIVTCTDRLERTTRDVNASRSYQAMSVQETRTCHSNSSLVFDGGKDQPVDKIE 611
F++ ++ + ++ N + E C+S+S VF ++ + I
Sbjct: 105 LEELFQKHKLSVDEDFCHYLKNDNCWTTKN-----ENLDCNSDSQ-VFPSLNNKELINIR 158
Query: 612 TDITSQSKLPPLLIVEKEGVYVLQMRVRSXQKFKAF---VRIEMVAPSGYLAAAIWPLLP 782
+ + + +K+G ++ + +++ ++ V + M+ P GY++A+ WPL+
Sbjct: 159 NVSNQERSMDVVARTQKDGFHIFIVSIKTENTDASWNLNVSLSMIGPHGYISASDWPLMI 218
Query: 783 FFGTXC 800
F+ C
Sbjct: 219 FYMVMC 224
>AC093675-2|AAY24214.1| 526|Homo sapiens unknown protein.
Length = 526
Score = 39.9 bits (89), Expect = 0.012
Identities = 33/186 (17%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Frame = +3
Query: 270 DVGKWDLELSGDDCHFTLAKSLFKNTKLIIAM---HCDAAVPLNITYDWTPEMCSPEYLH 440
++G W ++ K++F +T + +++ HC V I + C E+ +
Sbjct: 45 ELGLWLETVNDKSGPLIFRKTMFNSTDIKLSVKSFHCSGPVKFTIVWHLKYHTCHNEHSN 104
Query: 441 Y---FEQRIVTCTDRLERTTRDVNASRSYQAMSVQETRTCHSNSSLVFDGGKDQPVDKIE 611
F++ ++ + ++ N + E C+S+S VF ++ + I
Sbjct: 105 LEELFQKHKLSVDEDFCHYLKNDNCWTTKN-----ENLDCNSDSQ-VFPSLNNKELINIR 158
Query: 612 TDITSQSKLPPLLIVEKEGVYVLQMRVRSXQKFKAF---VRIEMVAPSGYLAAAIWPLLP 782
+ + + +K+G ++ + +++ ++ V + M+ P GY++A+ WPL+
Sbjct: 159 NVSNQERSMDVVARTQKDGFHIFIVSIKTENTDASWNLNVSLSMIGPHGYISASDWPLMI 218
Query: 783 FFGTXC 800
F+ C
Sbjct: 219 FYMVMC 224
>BC069240-1|AAH69240.1| 494|Homo sapiens TMEM87A protein protein.
Length = 494
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 854 WRDLLRIQYWIG 889
WRDLLRIQ+WIG
Sbjct: 191 WRDLLRIQFWIG 202
>AK075403-1|BAC11598.1| 564|Homo sapiens protein ( Homo sapiens
cDNA PSEC0094 fis, clone NT2RP2001499, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 564
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 854 WRDLLRIQYWIG 889
WRDLLRIQ+WIG
Sbjct: 261 WRDLLRIQFWIG 272
Score = 30.7 bits (66), Expect = 7.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 THSFSDVGKWDLELSGDDCHFTLAKSLFKNTKLIIAMH---CDAAVPLNITYDWTPEMCS 425
T + +D KW + + +F+ K LF+NT + + CD + LNIT+ C
Sbjct: 42 TVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCD--LSLNITWYLKSADCY 99
Query: 426 PEYLHYFEQRIVTCTDRLE 482
E ++ + + ++L+
Sbjct: 100 NEIYNFKAEEVELYLEKLK 118
>AK074870-1|BAC11256.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ90389 fis, clone NT2RP2005463, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 555
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 854 WRDLLRIQYWIG 889
WRDLLRIQ+WIG
Sbjct: 252 WRDLLRIQFWIG 263
Score = 30.7 bits (66), Expect = 7.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 THSFSDVGKWDLELSGDDCHFTLAKSLFKNTKLIIAMH---CDAAVPLNITYDWTPEMCS 425
T + +D KW + + +F+ K LF+NT + + CD + LNIT+ C
Sbjct: 33 TVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCD--LSLNITWYLKSADCY 90
Query: 426 PEYLHYFEQRIVTCTDRLE 482
E ++ + + ++L+
Sbjct: 91 NEIYNFKAEEVELYLEKLK 109
>AF132733-1|AAF66444.1| 555|Homo sapiens unknown protein.
Length = 555
Score = 31.5 bits (68), Expect = 4.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 854 WRDLLRIQYWIG 889
WRDLLRIQ+WIG
Sbjct: 252 WRDLLRIQFWIG 263
Score = 30.7 bits (66), Expect = 7.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 THSFSDVGKWDLELSGDDCHFTLAKSLFKNTKLIIAMH---CDAAVPLNITYDWTPEMCS 425
T + +D KW + + +F+ K LF+NT + + CD + LNIT+ C
Sbjct: 33 TVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCD--LSLNITWYLKSADCY 90
Query: 426 PEYLHYFEQRIVTCTDRLE 482
E ++ + + ++L+
Sbjct: 91 NEIYNFKAEEVELYLEKLK 109
>BC005335-1|AAH05335.1| 181|Homo sapiens TMEM87A protein protein.
Length = 181
Score = 30.7 bits (66), Expect = 7.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 THSFSDVGKWDLELSGDDCHFTLAKSLFKNTKLIIAMH---CDAAVPLNITYDWTPEMCS 425
T + +D KW + + +F+ K LF+NT + + CD + LNIT+ C
Sbjct: 33 TVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCD--LSLNITWYLKSADCY 90
Query: 426 PEYLHYFEQRIVTCTDRLE 482
E ++ + + ++L+
Sbjct: 91 NEIYNFKAEEVELYLEKLK 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,271,981
Number of Sequences: 237096
Number of extensions: 2430143
Number of successful extensions: 4787
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4787
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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