Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP04_F_A04
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 34 0.023
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 31 0.28
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.37
SPAC22F8.12c |shf1||small histone ubiquitination factor Shf1|Sch... 29 0.86
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 1.1
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 28 1.5
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 28 1.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 2.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.5
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 27 3.5
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch... 27 3.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.5
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 27 3.5
SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 4.6
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 4.6
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 6.1
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 6.1
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 26 8.1
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 8.1
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 8.1
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 8.1
SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual 26 8.1
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.3 bits (75), Expect = 0.023
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 481 TANNTTPNLYPITTRIYRTTKVCRSTDRV--CPITPKTPSTLRTFPITPKTYPNTLKMHP 654
T+ NTT P TT + TT V T V + P T T + P T+ NT P
Sbjct: 100 TSLNTTTTTAPPTTHVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHANTTSFVP 159
Query: 655 STAK 666
+T +
Sbjct: 160 TTTE 163
Score = 31.9 bits (69), Expect = 0.12
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +1
Query: 481 TANNTTPNLYPITTRIYRTTKVCRSTDRVCPITPKTPST---LRTFPITPKTYPNTLKMH 651
T++N+T P TT + TT V +T T P+T T + P T+ NT +
Sbjct: 75 TSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNTTTVV 134
Query: 652 PSTAKPYPNTANQFPIISH 708
P T + NT P +H
Sbjct: 135 PPTT--HVNTTTVVPPTTH 151
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +3
Query: 564 SLPHYPQNPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNSTIPQNRYQ 743
+LP P ++ + + +P SQ P H+ ++ S S P Y
Sbjct: 142 NLPDKKSRPSSQSSIFLSNWSTIFSSNASPTDSQLSPTHTSTIAELAASTLSIFPSGSYA 201
Query: 744 NNTI-SPKRIS-DTNTKITRS 800
+T SP R S D++T + RS
Sbjct: 202 GSTFGSPSRSSIDSSTYLPRS 222
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 30.3 bits (65), Expect = 0.37
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Frame = +3
Query: 570 PHYPQNPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQ----HSQPVSHYQPSHNSTIPQNR 737
PH PQ + P Q + ++ Q + PV PS + +PQ
Sbjct: 745 PHLPQAQLPSATGQSGVVQQPYQTQPSVTNNNVATQPVIASTVPVQTAAPSSQTAVPQTI 804
Query: 738 YQNNTISPKRISDTNTKITRSILWAIRPEXGSSGQPRS 851
+Q+N +P+ + ++ SI P+ S QPRS
Sbjct: 805 HQSNAFTPRGKHASGSR--NSISSTKSPQHKLSDQPRS 840
>SPAC22F8.12c |shf1||small histone ubiquitination factor
Shf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 165
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 612 HHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNST 722
H P+ + ++P S +H+ P + PS+NST
Sbjct: 42 HQRTKTPRSSYDSPSSSTNSKEHNSPYHYRVPSNNST 78
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 561 QSLPHYPQNPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHN-STIPQNR 737
QS +N + ++VS HT+ PQ AQN + SQ ++ + N + P+
Sbjct: 1430 QSRSFTNENNDNLRSVSRHTRREPQQAQNLNARRE---HESQKSDRWRQNGNVNRNPRVS 1486
Query: 738 YQNNT-ISPKRISDTN 782
N+T +S +R S+ N
Sbjct: 1487 NNNSTNVSRERSSEAN 1502
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 609 SHHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNSTIPQNRYQNNTISP 761
S+H ++ P H T P H P H+ HN+ P + +SP
Sbjct: 154 SNHVRSCPPFPPTQHHHPHTRPPHHPPHPHF---HNNNYPPPYCFQSPVSP 201
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 300 ERQRQINENGEIVDVPPPDNYHQQIDNYANEML 398
E QR+IN + ++ +PP D+YH + N+A + L
Sbjct: 55 ELQRRINNDPKVRFLPPVDSYHPK-RNHARQKL 86
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 497 HPTSTQS-QPESIEQPKCVAARTESAPLPPKPPARSERFPSHPKRTP 634
HP ST +P+S P+ A P+ PP + P+ P P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 25.8 bits (54), Expect = 8.1
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Frame = +3
Query: 624 NVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNST-IPQNRYQNNTISPKRISDTNTKITRS 800
+VP A APQH S P + P +S PQ Q TN ++S
Sbjct: 1528 HVPSPAPPAPQHPSAAALSSAPADNSMPHRSSPYAPQEPVQKPQAINNIAPATNLGTSQS 1587
Query: 801 ILWAIRPEXGSSGQPRSVGS 860
+ P +SG P ++ +
Sbjct: 1588 FSPRMGP-VNNSGSPLAMNA 1606
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 2.6
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 481 TANNTTPNLYPITTRIYRTTKVCRSTDRVCPITPKTPSTLRTFPITPKTY-PNTLKMHPS 657
T ++ + +P +T + +T STD + + P ST IT + P++ +
Sbjct: 161 TIYSSATSSFPYSTDVSVSTGT--STD-IVTLPPPASSTSSFSTITNTSMIPSSSSFTTT 217
Query: 658 TAKPYPNTANQFP--IISHPTIPQSRKIVTRTILS 756
T PY NT++ P +IS ++ S + T I S
Sbjct: 218 TGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITS 252
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Frame = +2
Query: 485 PTTLHPTSTQSQPESIEQPKCVAARTE-----SAPLPPKPPARSE 604
PT P S S P S + P A T + P PP PP E
Sbjct: 156 PTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVE 200
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 227 KDQSEHEDHK*RGVPRRSREESPDGEAEADQRKRRNS 337
K++ E +D K + R+S EES DGE+ ++K + S
Sbjct: 471 KEKKEKKDKKHKKSKRKS-EESEDGESPKKKKKSKKS 506
>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 840
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 228 RIKANTKIISNVAYHGDLEKKAQMERQRQINENGEIVDVPP 350
RIK T+ + Y D+++ + RQR+ EN EI D+ P
Sbjct: 612 RIKDLTRRGIDNIYVKDIDRPWNVPRQRKKKENSEIEDLRP 652
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.5
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 481 TANNTTPNLYPITTRIYRTTKVCRSTDRVCPITPKTPSTLRTFPITPKTYPNTLKMHPST 660
T +++P L +T +T + + + P+TP P T + P+T T T P T
Sbjct: 379 TGTSSSP-LLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLT-TTNCTTSTSVPYT 436
Query: 661 AKPYPNT 681
+ P +T
Sbjct: 437 STPVTST 443
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 515 SQPESIEQPKCVAARTESAPLPPKPPARSERFPSHPKRTPTRSK 646
S S +P+ S PLPPKP +RS+ S R TRS+
Sbjct: 296 SDNNSPSKPEIPFRHPTSKPLPPKPLSRSK--SSSLSRNQTRSQ 337
>SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 325 FSLICLCLSIWAFFSR-SPWYATLLMIFVFALIL 227
FSL L +S+ FF + +P+Y+ L + FAL+L
Sbjct: 16 FSLCTLVISVPFFFLQMTPFYSILCFLSFFALLL 49
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 576 YPQNPQHAQNVSHHTQNVPQHAQNAPQHSQT----LPQHSQPVSH 698
+P +P + ++ H QH +N+P +S+T +P+ + SH
Sbjct: 166 HPSSPVNGKSSDIHKSQSYQHLKNSPPNSRTARKPVPRRANSASH 210
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 574 ITPKTPSTLRTFPITPKTYPNTLKMHPSTAKP-YPNTANQFP 696
+T PS L+ P T+PN PS A P +PN++ P
Sbjct: 359 VTAAIPSPLQNTNPAPSTFPN-----PSVASPAFPNSSTSNP 395
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 554 ARTESAPLPPKPPARSERFPSHPKRTPTRSK 646
A+ + P PP PPA FP P P R K
Sbjct: 872 AKRFNLPTPPVPPALCHAFPPGP-NNPHREK 901
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 574 ITPKTPSTLRTFPITPKTYPNTLKMHPSTAKPYPN 678
+T + + L T +TP+ + TL +HP T PN
Sbjct: 756 LTYGSKNPLPTEKVTPRLFNFTLHLHPGTLIIQPN 790
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 306 QRQINENGEIVDVPPPDNYHQQIDNYANE 392
QR +ENG + + PP NY ++++ + E
Sbjct: 567 QRLDDENGFLTLLEPPVNYENEVESSSGE 595
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 615 HTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNSTIPQNRYQN 746
++ ++ Q QN H T+ + +S PSH+S++P N N
Sbjct: 286 NSSSINQVHQNET-HGSTISVPNPNLSQMGPSHSSSVPSNLSPN 328
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 585 NPQHAQNVSHHTQNVPQHAQNAPQHSQTLPQHSQPVSHYQPSHNSTIPQNRYQNNTISP 761
+PQ N + +H P + + Q + PVS P+ +T + ++ TI P
Sbjct: 638 SPQSYMNSRYSVDVGKEHMSMIPNQTAPMIQPNVPVSANSPAQANTPAADSTKSGTIQP 696
>SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 687 PVSHYQPSHNSTIPQNRYQNNTISPK 764
PVS + P H T+ +NR +NN PK
Sbjct: 166 PVSMHNPQHVFTVLENR-RNNVEGPK 190
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,954,859
Number of Sequences: 5004
Number of extensions: 56949
Number of successful extensions: 304
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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