Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_A02
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0091 - 5190536-5191794,5191878-5192030,5192501-5193099,519...    29   6.7  
05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-89...    29   6.7  
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129...    28   8.8  

>10_02_0091 - 5190536-5191794,5191878-5192030,5192501-5193099,
            5193771-5193837,5194177-5195170
          Length = 1023

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/44 (22%), Positives = 24/44 (54%)
 Frame = +3

Query: 627  CSISTGELSFDDTIDQIDEEKIDQCIEEAFEELSGSSQVCARMK 758
            CS    E+      D +D + +++  EE  +E++  +++C ++K
Sbjct: 894  CSYFLSEIKTRPITDMVDAQVLEEANEEDIKEVASLAEMCLKLK 937


>05_01_0133 +
           895107-895280,895960-896271,896815-897081,897161-897265
          Length = 285

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +3

Query: 378 LKKVRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDI 557
           +KK  R     LSD   +D     R  Q   A+D     +NG+I+S    + +  EI++ 
Sbjct: 69  IKKRGRASLVDLSDILGVDLYHVERQSQKVVADDPSLMLINGEIMSQSYWDTVTEEINEK 128

Query: 558 FKSIDRLASA 587
            +   ++A A
Sbjct: 129 LQERSQIALA 138


>01_06_0944 +
           33211652-33212427,33212492-33212660,33212825-33212936,
           33213061-33213159,33213237-33213394,33214911-33215062,
           33215162-33215249,33215399-33215476,33215516-33215690,
           33216701-33217002
          Length = 702

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 189 SMGXKLLALETILLRNXQWMXLEXAWKPVDLDEXRTEEDNEPAMTTMLSALDLKKTT 359
           S G  LL +   L +  +W  L          E +    N P MT ++SALD + TT
Sbjct: 510 SFGVLLLEIAWELWKEGRWSELADPSIYNACPEHKESPINRPTMTEIISALDNESTT 566


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,998,575
Number of Sequences: 37544
Number of extensions: 282951
Number of successful extensions: 820
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)