Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP04_F_A02
         (901 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061488-1|AAL29036.1|  244|Drosophila melanogaster LD45195p pro...    32   0.93 
AE014296-508|AAF47684.1|  244|Drosophila melanogaster CG1240-PA ...    32   0.93 
BT003753-1|AAO41417.1|  343|Drosophila melanogaster RH05737p pro...    29   8.7  
AY051674-1|AAK93098.1|  366|Drosophila melanogaster LD22649p pro...    29   8.7  
AE014297-1831|AAG22152.1|  343|Drosophila melanogaster CG12207-P...    29   8.7  
AE014297-1830|AAN13603.1|  366|Drosophila melanogaster CG12207-P...    29   8.7  
AE014297-1829|AAN13602.1|  366|Drosophila melanogaster CG12207-P...    29   8.7  

>AY061488-1|AAL29036.1|  244|Drosophila melanogaster LD45195p
           protein.
          Length = 244

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = +3

Query: 510 ISAVSIEEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEK 689
           +S +S E++ REI  + K  D    +   +R +    + CS+ + +  FD  + ++  E+
Sbjct: 1   MSDISSEDLRREIQAVLKDADLATISAKRVREQVEGKLNCSLLSRKKEFDKIVMEVINEQ 60

Query: 690 IDQ 698
            D+
Sbjct: 61  QDE 63


>AE014296-508|AAF47684.1|  244|Drosophila melanogaster CG1240-PA
           protein.
          Length = 244

 Score = 32.3 bits (70), Expect = 0.93
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = +3

Query: 510 ISAVSIEEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISTGELSFDDTIDQIDEEK 689
           +S +S E++ REI  + K  D    +   +R +    + CS+ + +  FD  + ++  E+
Sbjct: 1   MSDISSEDLRREIQAVLKDADLATISAKRVREQVEGKLNCSLLSRKKEFDKIVMEVINEQ 60

Query: 690 IDQ 698
            D+
Sbjct: 61  QDE 63


>BT003753-1|AAO41417.1|  343|Drosophila melanogaster RH05737p
           protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 438 NDFIRNLQNNEANDQQFFFVNGQIISAVSIEEIC-REIDDIF-KSIDRLASATSTLRNRK 611
           NDF+  + N  +  +++   +  ++S+ S  +IC     D+F +    L ++  T  N +
Sbjct: 237 NDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDR 296

Query: 612 PDVVQCSISTGELSFDDT 665
           P   Q   STG  +  DT
Sbjct: 297 PSQYQRHSSTGSGNSSDT 314


>AY051674-1|AAK93098.1|  366|Drosophila melanogaster LD22649p
           protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 438 NDFIRNLQNNEANDQQFFFVNGQIISAVSIEEIC-REIDDIF-KSIDRLASATSTLRNRK 611
           NDF+  + N  +  +++   +  ++S+ S  +IC     D+F +    L ++  T  N +
Sbjct: 260 NDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDR 319

Query: 612 PDVVQCSISTGELSFDDT 665
           P   Q   STG  +  DT
Sbjct: 320 PSQYQRHSSTGSGNSSDT 337


>AE014297-1831|AAG22152.1|  343|Drosophila melanogaster CG12207-PA,
           isoform A protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 438 NDFIRNLQNNEANDQQFFFVNGQIISAVSIEEIC-REIDDIF-KSIDRLASATSTLRNRK 611
           NDF+  + N  +  +++   +  ++S+ S  +IC     D+F +    L ++  T  N +
Sbjct: 237 NDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDR 296

Query: 612 PDVVQCSISTGELSFDDT 665
           P   Q   STG  +  DT
Sbjct: 297 PSQYQRHSSTGSGNSSDT 314


>AE014297-1830|AAN13603.1|  366|Drosophila melanogaster CG12207-PC,
           isoform C protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 438 NDFIRNLQNNEANDQQFFFVNGQIISAVSIEEIC-REIDDIF-KSIDRLASATSTLRNRK 611
           NDF+  + N  +  +++   +  ++S+ S  +IC     D+F +    L ++  T  N +
Sbjct: 260 NDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDR 319

Query: 612 PDVVQCSISTGELSFDDT 665
           P   Q   STG  +  DT
Sbjct: 320 PSQYQRHSSTGSGNSSDT 337


>AE014297-1829|AAN13602.1|  366|Drosophila melanogaster CG12207-PB,
           isoform B protein.
          Length = 366

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 438 NDFIRNLQNNEANDQQFFFVNGQIISAVSIEEIC-REIDDIF-KSIDRLASATSTLRNRK 611
           NDF+  + N  +  +++   +  ++S+ S  +IC     D+F +    L ++  T  N +
Sbjct: 260 NDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADVFPQRRHPLNNSYKTNNNDR 319

Query: 612 PDVVQCSISTGELSFDDT 665
           P   Q   STG  +  DT
Sbjct: 320 PSQYQRHSSTGSGNSSDT 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,135,127
Number of Sequences: 53049
Number of extensions: 477481
Number of successful extensions: 1447
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)