Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P24
         (917 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    26   1.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   2.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   4.2  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   5.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   5.6  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    24   7.4  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   7.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   9.8  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.8  

>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 706 IPKRIFEEWACL-DWKISYFCITISKSIKSCTE 801
           I K++  +WACL  W+ SY      K+    T+
Sbjct: 37  ISKKLLPDWACLVQWESSYSTTATHKNTDGSTD 69


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +3

Query: 561 EELRTIQFDSNNIEHEEKLLKLWSLLVPDETLESRISKQWQYIGFQGD 704
           + + TI++  + I H    L+LW+L +    L   +      IG + D
Sbjct: 691 QAIHTIEYILSTISHTASYLRLWALSLAHAELSEVLYNMVFTIGLRND 738


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 745 NPSKPIPRKSVLGSSPWNPIYCHCFEIR 662
           N S  +P+ S+LG + WN +Y    +++
Sbjct: 641 NLSTGVPQGSILGPTLWNVMYDSVLDVQ 668


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 115 DNSRNTVFWCCFNPEYFFSLKQCYFTIFGQ 204
           D  R T  W  FNP+YF   K+ + TI+G+
Sbjct: 463 DRFRYTA-WIKFNPDYF---KRDWSTIYGE 488


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 739 SKPIPRKSVLGSSPWNPIY 683
           S  +P++S+LG + WN +Y
Sbjct: 637 SAGVPQESILGPTLWNVMY 655


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 522 EQIWSYKNLVIEVEELRTIQFDSNNIEHEE 611
           + + SYK   I V++L TI  D     HEE
Sbjct: 13  DDMLSYKKPQIFVDQLLTIPNDGKPFTHEE 42


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 730 IPRKSVLGSSPWNPIY 683
           +P+ SVLG + WN IY
Sbjct: 662 VPQGSVLGLTLWNVIY 677


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 742 DWKISYFCITISKSIKSCTEPLTTPL 819
           DW   Y C ++ ++++S    LT+ L
Sbjct: 295 DWSFFYQCTSVDEAVQSFNALLTSAL 320


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 739 SKPIPRKSVLGSSPWNPIY 683
           S  +P+ SVLG + WN +Y
Sbjct: 618 SAGVPQGSVLGPTLWNVMY 636


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 739 SKPIPRKSVLGSSPWNPIYCHCFEI 665
           S  +P+ S+LG + WN +Y   F +
Sbjct: 698 SAGVPQGSILGPTLWNMMYDGVFGV 722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 952,797
Number of Sequences: 2352
Number of extensions: 19061
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)