Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_P23
(964 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 253 1e-67
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 170 1e-42
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 117 1e-26
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 117 1e-26
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 117 1e-26
Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.30
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.6
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.6
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 2.0
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.8
Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.5
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 253 bits (620), Expect = 1e-67
Identities = 120/142 (84%), Positives = 134/142 (94%)
Frame = +1
Query: 301 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 480
IINTFYSNKEI+LRELISN+SDALDKIRY++LT+PS+LD+GKEL+IKI PNK E TLTI+
Sbjct: 21 IINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIM 80
Query: 481 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 660
DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYS++LVAD+V V S
Sbjct: 81 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTS 140
Query: 661 KHNDDEQYVWESSAGGSFTVRP 726
K+NDD+ Y WESSAGGSF VRP
Sbjct: 141 KNNDDDSYQWESSAGGSFVVRP 162
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 170 bits (414), Expect = 1e-42
Identities = 86/148 (58%), Positives = 109/148 (73%), Gaps = 5/148 (3%)
Frame = +1
Query: 301 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 480
IIN+ Y NKEIFLRELISN+SDALDKIR SLTDP +L +E+ +KI ++ L I
Sbjct: 77 IINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETEEMSVKIKADRENRLLHIT 136
Query: 481 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS-----MIGQFGVGFYSSYLVADR 645
DTG+GMT+ DL+NNLGTIA+SGT F+ L A S +IGQFGVGFY+++LVADR
Sbjct: 137 DTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQDLIGQFGVGFYAAFLVADR 196
Query: 646 VTVHSKHNDDEQYVWESSAGGSFTVRPD 729
V V +K+NDD+QY+WES + SFT+ D
Sbjct: 197 VVVTTKNNDDDQYIWESDS-ASFTISKD 223
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 117 bits (281), Expect = 1e-26
Identities = 66/148 (44%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Frame = +1
Query: 301 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 480
+ + YS+ E+F+RELISN+SDAL+K RY L + E I+I NK++ T+T
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRRYAELKG-DVAEGPSE--IRITTNKDKRTITFE 114
Query: 481 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 660
DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVGFYS+++VAD V V +
Sbjct: 115 DTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTT 173
Query: 661 K---HNDDEQYVWESSAGGSFTVRPDSG 735
+ +D + W + S+ + SG
Sbjct: 174 RKVGSSDADGLQWTWNGDNSYEIAETSG 201
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 117 bits (281), Expect = 1e-26
Identities = 66/148 (44%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Frame = +1
Query: 301 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 480
+ + YS+ E+F+RELISN+SDAL+K RY L + E I+I NK++ T+T
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRRYAELKG-DVAEGPSE--IRITTNKDKRTITFE 114
Query: 481 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 660
DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVGFYS+++VAD V V +
Sbjct: 115 DTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTT 173
Query: 661 K---HNDDEQYVWESSAGGSFTVRPDSG 735
+ +D + W + S+ + SG
Sbjct: 174 RKVGSSDADGLQWTWNGDNSYEIAETSG 201
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 117 bits (281), Expect = 1e-26
Identities = 66/148 (44%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Frame = +1
Query: 301 IINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII 480
+ + YS+ E+F+RELISN+SDAL+K RY L + E I+I NK++ T+T
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRRYAELKG-DVAEGPSE--IRITTNKDKRTITFE 114
Query: 481 DTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHS 660
DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVGFYS+++VAD V V +
Sbjct: 115 DTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTT 173
Query: 661 K---HNDDEQYVWESSAGGSFTVRPDSG 735
+ +D + W + S+ + SG
Sbjct: 174 RKVGSSDADGLQWTWNGDNSYEIAETSG 201
>Z68227-2|CAA92509.1| 322|Caenorhabditis elegans Hypothetical
protein F49C12.4 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +1
Query: 304 INTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIID 483
+N + N ++F ++ +S+ + YESLT + + +I I+PNK E +T++
Sbjct: 75 LNPYRGNHDLFWSAFVNKTSECDNLKEYESLTIRPVANKDEVKFI-ILPNK-ETNITMVT 132
Query: 484 TGIG 495
GIG
Sbjct: 133 LGIG 136
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 435 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 596
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 435 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 596
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 2.0
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +3
Query: 456 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 596
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +3
Query: 423 QRAVHQDHSQQERGHSYDH 479
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 450 QQERGHSYDHRYRYWYDQGRFGEQFGN 530
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z32679-2|CAA83592.1| 385|Caenorhabditis elegans Hypothetical
protein C05B5.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = -3
Query: 380 ILSKASDELEISSRRKISLLE*KVLMIQGHKLSDLSLEREGFNLRWLCLHFFRHF 216
IL + +D + + S R + ++ + + + + +E N+ WL + +F+HF
Sbjct: 89 ILEEDADAIRVKSIRMAGFIAQCIIFLFVYTIVTMDVEIWKINMDWLKIQYFQHF 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,768,748
Number of Sequences: 27780
Number of extensions: 377747
Number of successful extensions: 1000
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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