Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P17
         (1007 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             31   1.9  
12_02_0299 - 17051570-17052474,17053542-17053755                       30   3.4  
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862...    30   3.4  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   5.9  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +1

Query: 142 PXXXXPPXNXGXPXPXXXPXSXVPXAPPPP 231
           P    PP + G P P   P    P  PPPP
Sbjct: 92  PPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121



 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 141 PPXXXPPXXXGXPXPPXXPXFXGXXXPPP 227
           PP   PP   G P PP  P       PPP
Sbjct: 92  PPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 141 PPXXXPPXXXGXPXPPXXPXFXGXXXPPP 227
           PP   PP     P PP  P F     PPP
Sbjct: 325 PPPPPPPPSFPWPFPPLAPLFPPYPSPPP 353


>10_08_0608 +
           19184722-19185224,19185331-19185410,19186048-19186235,
           19187021-19187927,19188015-19188142,19189270-19189356,
           19189422-19189472,19189582-19189668,19189746-19189873,
           19190469-19190608,19190721-19190882,19190964-19192733,
           19192807-19192922,19193077-19193227,19193243-19193371,
           19193598-19194139
          Length = 1722

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 141 PPXXXPPXXXGXPXPPXXPXFXGXXXPPP 227
           PP   PP     P PP  P   G   PPP
Sbjct: 29  PPPHPPPPPPLEPAPPSTPQLRGEASPPP 57


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 156  PPXXXGXPXPPXXPXFXGXXXPPP 227
            PP   G P PP  P   G   PPP
Sbjct: 1198 PPTPPGAPAPPMPPGVPGGPPPPP 1221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,173
Number of Sequences: 37544
Number of extensions: 203091
Number of successful extensions: 1220
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2963829220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)