Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P17
         (1007 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC142625-1|AAI42626.1|  462|Homo sapiens adrenergic, alpha-2C-, ...    31   8.8  
AY605898-1|AAT02221.1|  462|Homo sapiens alpha2C adrenergic rece...    31   8.8  
AF280399-1|AAG28076.1|  462|Homo sapiens alpha 2C adrenergic rec...    31   8.8  
AC141928-1|AAY41059.1|  462|Homo sapiens unknown protein.              31   8.8  

>BC142625-1|AAI42626.1|  462|Homo sapiens adrenergic, alpha-2C-,
           receptor protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 314 ERREKRGTXXRXGQXRXGXKXXGAXRXXGGGGAXGTXEXGXXXGXGXPXXXG 159
           ERR +RG   R G+ R G +  GA    G G   G  E G       P   G
Sbjct: 293 ERRRRRGALRRGGRRRAGAE-GGAGGADGQGAGPGAAESGALTASRSPGPGG 343


>AY605898-1|AAT02221.1|  462|Homo sapiens alpha2C adrenergic
           receptor protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 314 ERREKRGTXXRXGQXRXGXKXXGAXRXXGGGGAXGTXEXGXXXGXGXPXXXG 159
           ERR +RG   R G+ R G +  GA    G G   G  E G       P   G
Sbjct: 293 ERRRRRGALRRGGRRRAGAE-GGAGGADGQGAGPGAAESGALTASRSPGPGG 343


>AF280399-1|AAG28076.1|  462|Homo sapiens alpha 2C adrenergic
           receptor protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 314 ERREKRGTXXRXGQXRXGXKXXGAXRXXGGGGAXGTXEXGXXXGXGXPXXXG 159
           ERR +RG   R G+ R G +  GA    G G   G  E G       P   G
Sbjct: 293 ERRRRRGALRRGGRRRAGAE-GGAGGADGQGAGPGAAESGALTASRSPGPGG 343


>AC141928-1|AAY41059.1|  462|Homo sapiens unknown protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 314 ERREKRGTXXRXGQXRXGXKXXGAXRXXGGGGAXGTXEXGXXXGXGXPXXXG 159
           ERR +RG   R G+ R G +  GA    G G   G  E G       P   G
Sbjct: 293 ERRRRRGALRRGGRRRAGAE-GGAGGADGQGAGPGAAESGALTASRSPGPGG 343


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,542,427
Number of Sequences: 237096
Number of extensions: 1219676
Number of successful extensions: 6218
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5524
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13489131544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)