Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P12
         (932 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    36   0.002
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    29   0.20 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.9  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   3.3  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    24   5.7  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    24   7.6  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    24   7.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   7.6  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +1

Query: 559 VLAAPLHWSNESRERLVKCAELAGFEVLQVISEPAAALLAY 681
           V+  P ++++  R+       +AG  V+++I+EP AA LAY
Sbjct: 3   VITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAY 43


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 15/63 (23%), Positives = 29/63 (46%)
 Frame = +2

Query: 308  DKRHRSQLLSTING**TVISMKMICHMLSYHHRAKFRTTKNLYMNSRQAKQHYTLVLITS 487
            +K H+   LST       I M  I   ++YH  +  R ++ LY+   + +    ++ +  
Sbjct: 893  NKIHKKLALSTEESSINEILMNSIQEQINYHQVSNIRLSRGLYVGYLKMQSSVDVIQVVV 952

Query: 488  PLK 496
            P+K
Sbjct: 953  PVK 955


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 205 GTISVIANDAGDRVTPAIIALNGTEWEIGLPAKSGQASSK 324
           G  + +A   GD+  P      G   ++G+P  SG+A +K
Sbjct: 466 GLPATVAAIKGDKGEPGFPGAIGRPGKVGVPGLSGEAGAK 505


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +1

Query: 139 NMASAYGIHLGNSTACLASFTNGTISVIANDAGDRVTPAIIALNGTEWEIGLPAKSGQ 312
           ++  A  +  G +TA L    NG    + N+    V P+ + +N T+    +PA  G+
Sbjct: 548 DLQQAAAVTTGATTADLLLGDNGVAVPLNNNLPTNVLPSGMIINTTDTGTTVPAGGGK 605


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 346 RLMNCDFNEDDLSYVELSSSCQIQNDEK 429
           +L  C  +E + +Y EL   CQ  +DE+
Sbjct: 57  KLAACVVSEHEQAYRELKQRCQEAHDER 84


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 235 GDRVTPAIIALNGTEWEIG 291
           G+R   A++A  G E+E+G
Sbjct: 335 GERARDALVAAGGPEYEVG 353


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 235 GDRVTPAIIALNGTEWEIG 291
           G+R   A++A  G E+E+G
Sbjct: 335 GERARDALVAAGGPEYEVG 353


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 394 LSSSCQIQNDEKLVYEFQTSETTLYSSPDNIATKIYAKL 510
           L++  Q+Q    +V+E +T ETTL    ++  T I AKL
Sbjct: 761 LTNEQQLQQLAGVVFEGETEETTLREELEHSRT-ILAKL 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,548
Number of Sequences: 2352
Number of extensions: 12546
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)