Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P11
         (962 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   148   8e-36
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   148   8e-36
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   145   5e-35
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   144   1e-34

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  148 bits (358), Expect = 8e-36
 Identities = 70/132 (53%), Positives = 88/132 (66%)
 Frame = +2

Query: 140 ERTXIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPS*XLLXQHYSDLASRPFFPGL 319
           E+T IM+KPDGVQRGL+G +I RFE           +        +HY+DL+S+PFF GL
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63

Query: 320 VKYMSSXPVVPMVWEGLNVVXTGRXMLGATNPTDSHXGTIRXDLXXXLGRNIIHGSDSVE 499
           V+Y+ S PVV MVWEG  VV TGR ++GATNP  +  GTIR D    +GRN+IHGSDSVE
Sbjct: 64  VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123

Query: 500 SATXXIXLWFTD 535
           +A   I LWF +
Sbjct: 124 NARKEIALWFPE 135


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  148 bits (358), Expect = 8e-36
 Identities = 75/154 (48%), Positives = 91/154 (59%)
 Frame = +2

Query: 128 AEQRERTXIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPS*XLLXQHYSDLASRPF 307
           A + ERT I +KPDGVQRGL+  I+ RFE           V PS     +HY DL  RPF
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 308 FPGLVKYMSSXPVVPMVWEGLNVVXTGRXMLGATNPTDSHXGTIRXDLXXXLGRNIIHGS 487
           F GL  ++SS PV+ MVWEG  V+  GR ++GAT+P  S  GTIR DL   +GRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161

Query: 488 DSVESATXXIXLWFTDTEVVGWTPAT*KLXLXVN 589
           D  E+A   I LWF   E+V +T    K    VN
Sbjct: 162 DGPETAKAEIGLWFEPRELVSYTSNEEKWIYGVN 195


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  145 bits (351), Expect = 5e-35
 Identities = 68/132 (51%), Positives = 88/132 (66%)
 Frame = +2

Query: 140 ERTXIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPS*XLLXQHYSDLASRPFFPGL 319
           E++ IM+KPDGVQRGL+G II RFE           +        QHY+DL+ +PFFPGL
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61

Query: 320 VKYMSSXPVVPMVWEGLNVVXTGRXMLGATNPTDSHXGTIRXDLXXXLGRNIIHGSDSVE 499
           V+Y+ S PVV MVWEG +VV TGR ++GAT P ++  GTIR D    +GRN+IHGSDSV+
Sbjct: 62  VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121

Query: 500 SATXXIXLWFTD 535
           +    I LWF +
Sbjct: 122 NGKKEIALWFPE 133


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  144 bits (348), Expect = 1e-34
 Identities = 67/138 (48%), Positives = 86/138 (62%)
 Frame = +2

Query: 140 ERTXIMVKPDGVQRGLVGTIIERFEXXXXXXXXXXXVWPS*XLLXQHYSDLASRPFFPGL 319
           E++ IM+KPDGVQRGLVG II RFE                 L  +HY DL  +PFFPGL
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62

Query: 320 VKYMSSXPVVPMVWEGLNVVXTGRXMLGATNPTDSHXGTIRXDLXXXLGRNIIHGSDSVE 499
           ++Y++S PVV M WEG  VV + R ++GATNP  +  GTIR DL    GRN++HGSDS +
Sbjct: 63  IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122

Query: 500 SATXXIXLWFTDTEVVGW 553
           +    I LWF + E+  W
Sbjct: 123 NGKREIALWFKEGELCEW 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,233,093
Number of Sequences: 37544
Number of extensions: 187683
Number of successful extensions: 357
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)