Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P09
         (923 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RQQ8 Cluster: Putative uncharacterized protein PY0103...    40   0.12 
UniRef50_Q239U5 Cluster: Putative uncharacterized protein; n=1; ...    39   0.21 
UniRef50_A5K830 Cluster: Putative uncharacterized protein; n=1; ...    35   3.4  

>UniRef50_Q7RQQ8 Cluster: Putative uncharacterized protein PY01034;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01034 - Plasmodium yoelii yoelii
          Length = 1073

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
 Frame = -3

Query: 531 DLAHYMNNERHYFENFLIL---TKT*QEILINATAKMLLYIFEVYSYIN--SKSKRSQTI 367
           D +HYM  E + + +FL+L    K  ++I I    K  LY+ + Y  +N  +K K     
Sbjct: 501 DFSHYMKTELYLYMSFLLLIVFCKIQRKIKITKFYKKKLYVLQEYVELNKDNKEKEYDVY 560

Query: 366 LFKSIVRCVRLINSV 322
           ++  I++ V L NS+
Sbjct: 561 VYSRILKSVELFNSI 575


>UniRef50_Q239U5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2709

 Score = 38.7 bits (86), Expect = 0.21
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = -3

Query: 462  QEILINATAKMLLYIFEVYSYINSKSKRSQTILFKSIVRCVRLINSVALY-VKLLS*QPK 286
            Q+ LI     +++Y+F   SY++S S+  QTI    I+      NS+ALY VK L  Q  
Sbjct: 2176 QQNLIELNLPVVVYVFNTLSYVDSFSEYQQTITNDEIIHIE--ANSIALYSVKFLQLQSF 2233

Query: 285  QINNMKTRINA 253
            Q+N    ++ A
Sbjct: 2234 QLNTQIIKLFA 2244


>UniRef50_A5K830 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 713

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 199 VLNVTNAQSKCQENCREICVNSRFHVIYLLRLLAE 303
           V N TN+Q+KCQ NC      S  H++  +RLL E
Sbjct: 302 VSNQTNSQTKCQTNCEPNSETSAEHLLQSVRLLEE 336


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,863,677
Number of Sequences: 1657284
Number of extensions: 8415363
Number of successful extensions: 17458
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17447
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84851082477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)