Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_P08
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222599-1|BAD96319.1| 259|Homo sapiens unc-50 homolog protein. 176 1e-43
CR533464-1|CAG38495.1| 259|Homo sapiens UNC50 protein. 175 1e-43
BC091481-1|AAH91481.1| 259|Homo sapiens UNC50 protein protein. 175 1e-43
BC025992-1|AAH25992.1| 259|Homo sapiens unc-50 homolog (C. eleg... 175 1e-43
BC017019-1|AAH17019.1| 259|Homo sapiens UNC50 protein protein. 175 1e-43
AY017215-1|AAK08987.1| 259|Homo sapiens UNC50 protein. 175 1e-43
BC039078-1|AAH39078.1| 259|Homo sapiens unc-50 homolog (C. eleg... 173 9e-43
AC010134-3|AAX93232.1| 133|Homo sapiens unknown protein. 152 1e-36
AC064860-1|AAY14975.1| 125|Homo sapiens unknown protein. 80 1e-14
AY438698-1|AAR13893.1| 207|Homo sapiens MLL5 protein. 35 0.34
BC130533-1|AAI30534.1| 527|Homo sapiens UDP glucuronosyltransfe... 31 5.6
AY542891-1|AAS48425.1| 527|Homo sapiens UDP-glucuronosyltransfe... 31 5.6
AY358727-1|AAQ89089.1| 527|Homo sapiens RSDK2559 protein. 31 5.6
AK025587-1|BAB15179.1| 449|Homo sapiens protein ( Homo sapiens ... 31 5.6
Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein. 31 7.4
U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein. 31 7.4
BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homo... 31 7.4
AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Ta... 31 7.4
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo... 31 7.4
AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein. 31 7.4
>AK222599-1|BAD96319.1| 259|Homo sapiens unc-50 homolog protein.
Length = 259
Score = 176 bits (428), Expect = 1e-43
Identities = 78/129 (60%), Positives = 103/129 (79%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+R+F+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRSFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + +L+VVF+D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>CR533464-1|CAG38495.1| 259|Homo sapiens UNC50 protein.
Length = 259
Score = 175 bits (427), Expect = 1e-43
Identities = 78/129 (60%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + +L+VV +D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 80.2 bits (189), Expect = 9e-15
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHLIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>BC091481-1|AAH91481.1| 259|Homo sapiens UNC50 protein protein.
Length = 259
Score = 175 bits (427), Expect = 1e-43
Identities = 78/129 (60%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + +L+VV +D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>BC025992-1|AAH25992.1| 259|Homo sapiens unc-50 homolog (C.
elegans) protein.
Length = 259
Score = 175 bits (427), Expect = 1e-43
Identities = 78/129 (60%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + +L+VV +D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>BC017019-1|AAH17019.1| 259|Homo sapiens UNC50 protein protein.
Length = 259
Score = 175 bits (427), Expect = 1e-43
Identities = 78/129 (60%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + +L+VV +D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>AY017215-1|AAK08987.1| 259|Homo sapiens UNC50 protein.
Length = 259
Score = 175 bits (427), Expect = 1e-43
Identities = 78/129 (60%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + +L+VV +D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 80.2 bits (189), Expect = 9e-15
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHLIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>BC039078-1|AAH39078.1| 259|Homo sapiens unc-50 homolog (C.
elegans) protein.
Length = 259
Score = 173 bits (420), Expect = 9e-43
Identities = 77/129 (59%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHL-RRX 638
VLLSIWL +S+I FG LD+ + + +VV +D +G G+L++TL W++SNK+L +R
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLPWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 639 PXGPDVEWG 665
DVEWG
Sbjct: 146 SRDYDVEWG 154
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 154 GYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 213
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 214 SALPFLK 220
>AC010134-3|AAX93232.1| 133|Homo sapiens unknown protein.
Length = 133
Score = 152 bits (369), Expect = 1e-36
Identities = 67/107 (62%), Positives = 87/107 (81%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
+A KRYKYL+RLF+F QMDFEFAAWQM+YLF +PQ+V+RNF+YRK TK Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTL 602
VLLSIWL +S+I FG LD+ + +L+VV +D +G G+L++TL
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATL 132
>AC064860-1|AAY14975.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GYAFDVH+NAF+P L +LH Q+ N ++ F+ LV NT WL ++ YY+Y++FLGY
Sbjct: 20 GYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGY 79
Query: 844 SNLXVLQ 864
S L L+
Sbjct: 80 SALPFLK 86
>AY438698-1|AAR13893.1| 207|Homo sapiens MLL5 protein.
Length = 207
Score = 35.1 bits (77), Expect = 0.34
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 177 KIKMKYSTSPTPNLHNYPRSTSPLPAPANYQ-PTTASAS 290
K+ S S TP++H PRSTS PA + PTT SA+
Sbjct: 24 KLHCPSSPSTTPSIHRTPRSTSTTPACCKFSTPTTPSAA 62
>BC130533-1|AAI30534.1| 527|Homo sapiens UDP
glucuronosyltransferase 2 family, polypeptide A3
protein.
Length = 527
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Frame = +3
Query: 222 NYPRSTSPLPAPANYQPTTASASVKRYKYLKR--------LFKFNQMDFEFAAWQMVY 371
N RS LPAP +Y P + R +L+R LF F D+++ W+ Y
Sbjct: 177 NMERSCGKLPAPLSYVPVPMTGLTDRMTFLERVKNSMLSVLFHFWIQDYDYHFWEEFY 234
>AY542891-1|AAS48425.1| 527|Homo sapiens
UDP-glucuronosyltransferase protein.
Length = 527
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Frame = +3
Query: 222 NYPRSTSPLPAPANYQPTTASASVKRYKYLKR--------LFKFNQMDFEFAAWQMVY 371
N RS LPAP +Y P + R +L+R LF F D+++ W+ Y
Sbjct: 177 NMERSCGKLPAPLSYVPVPMTGLTDRMTFLERVKNSMLSVLFHFWIQDYDYHFWEEFY 234
>AY358727-1|AAQ89089.1| 527|Homo sapiens RSDK2559 protein.
Length = 527
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Frame = +3
Query: 222 NYPRSTSPLPAPANYQPTTASASVKRYKYLKR--------LFKFNQMDFEFAAWQMVY 371
N RS LPAP +Y P + R +L+R LF F D+++ W+ Y
Sbjct: 177 NMERSCGKLPAPLSYVPVPMTGLTDRMTFLERVKNSMLSVLFHFWIQDYDYHFWEEFY 234
>AK025587-1|BAB15179.1| 449|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21934 fis, clone HEP04364. ).
Length = 449
Score = 31.1 bits (67), Expect = 5.6
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Frame = +3
Query: 222 NYPRSTSPLPAPANYQPTTASASVKRYKYLKR--------LFKFNQMDFEFAAWQMVY 371
N RS LPAP +Y P + R +L+R LF F D+++ W+ Y
Sbjct: 99 NMERSCGKLPAPLSYVPVPMTGLTDRMTFLERVKNSMLSVLFHFWIQDYDYHFWEEFY 156
>Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.
Length = 1087
Score = 30.7 bits (66), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 186 MKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASASVKR 299
M Y SP+P+ Y T P+P Y P T + +++
Sbjct: 937 MAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 974
>U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.
Length = 1087
Score = 30.7 bits (66), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 186 MKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASASVKR 299
M Y SP+P+ Y T P+P Y P T + +++
Sbjct: 937 MAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 974
>BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homolog
(S. cerevisiae) protein.
Length = 1087
Score = 30.7 bits (66), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 186 MKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASASVKR 299
M Y SP+P+ Y T P+P Y P T + +++
Sbjct: 937 MAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 974
>AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Tat-CT1
protein.
Length = 1087
Score = 30.7 bits (66), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 186 MKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASASVKR 299
M Y SP+P+ Y T P+P Y P T + +++
Sbjct: 937 MAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 974
>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
variant protein.
Length = 1116
Score = 30.7 bits (66), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 186 MKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASASVKR 299
M Y SP+P+ Y T P+P Y P T + +++
Sbjct: 966 MAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 1003
>AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.
Length = 1087
Score = 30.7 bits (66), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 186 MKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASASVKR 299
M Y SP+P+ Y T P+P Y P T + +++
Sbjct: 937 MAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 974
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,079,776
Number of Sequences: 237096
Number of extensions: 2877407
Number of successful extensions: 8714
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8704
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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