Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_P08
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48055-4|CAA88132.2| 301|Caenorhabditis elegans Hypothetical pr... 140 2e-33
Z95559-10|CAB63364.2| 327|Caenorhabditis elegans Hypothetical p... 34 0.12
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70206-1|CAA94124.1| 407|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 29 4.5
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 29 5.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 5.9
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 28 7.8
AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical... 28 7.8
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 28 7.8
>Z48055-4|CAA88132.2| 301|Caenorhabditis elegans Hypothetical
protein T07A5.2 protein.
Length = 301
Score = 140 bits (338), Expect = 2e-33
Identities = 68/128 (53%), Positives = 87/128 (67%)
Frame = +3
Query: 282 SASVKRYKYLKRLFKFNQMDFEFAAWQMVYLFIAPQKVFRNFNYRKHTKSQFARDDPAFL 461
SA K ++ +RL QMDFEFA WQM+YL I P KV++NF YRK TK QFARDDPAFL
Sbjct: 59 SAFAKLSRFTRRLVHIRQMDFEFALWQMLYLLIQPSKVYKNFIYRKRTKDQFARDDPAFL 118
Query: 462 VLLSIWLFLSSICFGLALDLTVGKVALFMLFVVFVDFIGAGILVSTLFWYLSNKHLRRXP 641
VLL++ L SSI + AL L F L+ VFVD IG G++++T+ W++SN+ LR+
Sbjct: 119 VLLALSLLFSSIFYAYALGLEKIGFFTFFLWSVFVDCIGVGVVIATVLWWVSNRFLRKV- 177
Query: 642 XGPDVEWG 665
DVEWG
Sbjct: 178 RDQDVEWG 185
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 664 GYAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYISFLGY 843
GY FDVH+NAFFP L LLH +L+ +++ F+S L+ NTFW + YY+YI+FLGY
Sbjct: 185 GYCFDVHLNAFFPMLILLHVIVPILYPTLIDSPAFLSILLGNTFWFLAACYYVYITFLGY 244
Query: 844 SNLXVL 861
+ L +L
Sbjct: 245 TALPIL 250
>Z95559-10|CAB63364.2| 327|Caenorhabditis elegans Hypothetical
protein Y41E3.15 protein.
Length = 327
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Frame = +1
Query: 673 FDVHINAFFPPLSLL---------HCFQIVLFNSILSQAGFV-SCLVSNTFWLASIIYYM 822
F V I +PP+ L C++I++F SI+ V SC +S + ++ ++
Sbjct: 43 FGVFIEFLYPPIIYLIFKTKLIRHSCYKIIVFLSIIDMIATVCSCFISGSLFIQGAVFCS 102
Query: 823 YISFLGYSNLXVLQTXGCPAAA 888
Y SF+ + VL T C + A
Sbjct: 103 YPSFIYITGTIVLTTW-CTSCA 123
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 770 SRVWSQTPSGSPRSYTTCTFPSWDTATXR 856
SR S+T S S + T+CTFP+ T T R
Sbjct: 120 SRKKSRTSSSSMEASTSCTFPARQTKTKR 148
>Z70206-1|CAA94124.1| 407|Caenorhabditis elegans Hypothetical
protein C49F8.1 protein.
Length = 407
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 210 PNLHNYPRSTSPLPAPANYQPTTASASVKRYKYLKRLFKFNQMDFEFAA 356
P L YP ++ PAP QPT + ++ + + L FN DF+ A
Sbjct: 273 PQLSQYPSPSTAAPAPVPEQPTLNNLPLEVKQSAQTL--FNDPDFQMLA 319
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 343 SNSPLGKWFTCSLPLRKYSETLTIGSIQNHSLRETTLHS----*CCSASG-YFCRQYVSD 507
++ P G+ + C L + S ++ NH R LH+ CC G F R+Y++
Sbjct: 201 ADEPFGELYQCQLCKKSISRHGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLAS 260
Query: 508 WH 513
H
Sbjct: 261 TH 262
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 343 SNSPLGKWFTCSLPLRKYSETLTIGSIQNHSLRETTLHS----*CCSASG-YFCRQYVSD 507
++ P G+ + C L + S ++ NH R LH+ CC G F R+Y++
Sbjct: 201 ADEPFGELYQCQLCKKSISRHGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLAS 260
Query: 508 WH 513
H
Sbjct: 261 TH 262
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 177 KIKMKYSTSPTPNLHNYPRSTSPLPAPANYQPTTASA 287
+ K+ +P++ YPR +P + ANY TT+++
Sbjct: 360 RTKLNQPADTSPSIVQYPRRQAPDSSRANYSATTSTS 396
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 207 TPNLHNYPRSTSPLPAPANYQPTTASASV 293
TP+ P STS P P+ PTT ++V
Sbjct: 484 TPSTQGVPTSTSNQPTPSTSNPTTPKSTV 512
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 517 SSANPKHIDDKNNQMLSNTKNAGSSLANCD 428
S+ P D+N SN++N+ + LA CD
Sbjct: 736 SNVTPTSGGDQNQNQQSNSRNSSAELAGCD 765
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 517 SSANPKHIDDKNNQMLSNTKNAGSSLANCD 428
S+ P D+N SN++N+ + LA CD
Sbjct: 736 SNVTPTSGGDQNQNQQSNSRNSSAELAGCD 765
>AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical
protein Y39A1A.22 protein.
Length = 710
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 667 YAFDVHINAFFPPLSLLHCFQIVLFNSILSQAGFVSCLVSNTFWLASIIYYMYIS 831
YA +HI F PPL+L+ I+L N I ++ FWL Y + S
Sbjct: 328 YAHMLHIPPFAPPLALMVVCLILLLNPIAKPDSVFH--RNSRFWLLKHCYKCFTS 380
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 334 KWISNSPLGKWFTCSLPLRKYSETLTIGSIQNHSLRETT 450
KW+SN + C +PL S T+TI +I +R TT
Sbjct: 507 KWVSNQNALLGYICQVPLP--SSTVTIETITTTYIRSTT 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,103,760
Number of Sequences: 27780
Number of extensions: 431028
Number of successful extensions: 1470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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