Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P07
         (931 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0651 + 30644241-30644615,30644751-30644858                       41   0.001
06_01_1033 - 8080179-8080685                                           40   0.002
02_04_0020 - 18956282-18956461,18956591-18956740,18957934-189580...    32   0.57 
07_01_0793 - 6169661-6169936,6170942-6171025,6171473-6171590,617...    32   0.75 
06_01_0197 - 1525945-1526622                                           28   9.2  

>02_05_0651 + 30644241-30644615,30644751-30644858
          Length = 160

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
 Frame = +1

Query: 361 MVKEKPNSIRIYDDEGFRRRAACIC--VRSDAETEVLLVTSSRRPDNWIXXXXXXXXXXX 534
           +V  +   ++ Y   G R    CI   VRS  E EVL++TS ++    +           
Sbjct: 4   LVARQGRELQRYTSAGGRIVVGCIPYRVRSGGEMEVLVITS-QKGHGMMFPKGGWELDES 62

Query: 535 XXXTAMREVLEEAGVIGKLGRCLGVFENREHKHRTE----VYVMTVTQELPEWED 687
               A RE LEEAGV G     LG +  +  ++ T     ++ + VT EL +W +
Sbjct: 63  MDEAARREALEEAGVRGDTETSLGCWYYKSRRYDTTYEGFMFPLRVTDELLQWPE 117


>06_01_1033 - 8080179-8080685
          Length = 168

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
 Frame = +1

Query: 361 MVKEKPNSIRIYDDE-GFRRRAACIC--VRSDAE-TEVLLVTSSRRP----DNWIXXXXX 516
           MV  +   ++ Y D  G R    CI   VR D    EVL+++S ++     D  +     
Sbjct: 5   MVARQGRELQRYSDNTGGRMVVGCIPYRVRGDGGGVEVLVISSQKKGAAAGDVVMFPKGG 64

Query: 517 XXXXXXXXXTAMREVLEEAGVIGKLGRCLG--VFENREHKHRTE--VYVMTVTQELPEWE 684
                     A RE LEEAGV+G++G  LG   + +R +    E  V+ + VT EL  W 
Sbjct: 65  WELDESVDEAARREALEEAGVLGEIGASLGRWCYRSRRYDATYEGFVFPLRVTDELDRWP 124

Query: 685 D 687
           +
Sbjct: 125 E 125


>02_04_0020 -
           18956282-18956461,18956591-18956740,18957934-18958017,
           18958283-18958403,18958525-18958604
          Length = 204

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
 Frame = +1

Query: 451 ETEVLLVTSSRRPDNWIXXXXXXXXXXXXXXTAMREVLEEAGVIGKLGR-CLG--VFENR 621
           + EVL+V++  R D  +               A RE +EEAGV G + R  LG  VF+++
Sbjct: 49  QVEVLMVSTPNRAD-MVFPKGGWEDDEEVYEAASREAMEEAGVKGIVNRTTLGHWVFKSK 107

Query: 622 EHKHRTE--------VYVMTVTQELPEWED 687
             ++ +         ++ M VT+EL  W +
Sbjct: 108 SSQNSSSPRGACKGYIFAMEVTEELESWPE 137


>07_01_0793 -
           6169661-6169936,6170942-6171025,6171473-6171590,
           6172917-6172987
          Length = 182

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
 Frame = +1

Query: 547 AMREVLEEAGVIGKLGRCLGVFENREHKH----------RTEVYVMTVTQELPEWED 687
           A RE +EEAGV G L + LG ++ +   H          R  V+ + V +EL  W +
Sbjct: 76  AAREAIEEAGVRGDLVQLLGFYDFKSKTHQDKFCPEGMCRAAVFALRVKEELASWPE 132


>06_01_0197 - 1525945-1526622
          Length = 225

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 567 GSRSDRETRTMSWSIREPRTQTPNRGLCY 653
           G R  R  R +S+S+R PRT  P RG+ +
Sbjct: 136 GLRPPRALRRLSYSLRCPRTGGPARGVVH 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,282,185
Number of Sequences: 37544
Number of extensions: 315045
Number of successful extensions: 664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)