Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P05
         (980 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0254 + 11089236-11089290,11089366-11089415,11089530-110895...    71   2e-12
11_01_0653 - 5285718-5287094                                           29   4.3  

>05_03_0254 +
           11089236-11089290,11089366-11089415,11089530-11089562,
           11090601-11091674,11092245-11092728,11092857-11092882,
           11092883-11092993,11093082-11093171,11093251-11093322,
           11094043-11094153,11095086-11095143,11095605-11095804,
           11096666-11096818,11097134-11097334
          Length = 905

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +3

Query: 300 LNLDSVQQQAFVIFFNSLPDKPPTTVRVFDRNDYYSIHGIDATTAAREVFSSVANIKRMG 479
           L LD+ Q Q F+ FF  LP +    +R+FDR DYY+ HG +AT  A+  + +++ ++++G
Sbjct: 16  LKLDARQAQGFISFFKKLP-QDSRAIRLFDRRDYYTAHGENATFIAKIYYHTMSALRQLG 74

Query: 480 VDPNRLDYLVLSKGNFEILIKKLLLVRRYR-VEIYVADGS 596
            + + L  + +SK  FE + + LLL R  R +E+Y   GS
Sbjct: 75  SNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGS 114


>11_01_0653 - 5285718-5287094
          Length = 458

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +3

Query: 405 SIHGIDATTAAREVFSSVANIKRMGVDPNRLDYLVLSKGNFEILIKKLLLVRRYRVEIYV 584
           SI G+      R++   V  +   G++P   DY++     F   ++K L+ R Y VE+ +
Sbjct: 351 SILGLSVNNLCRKIEFLVTKV---GLEP---DYILSKPVLFACSLEKRLMPRHYIVEVLL 404

Query: 585 ADGSIK 602
           A G IK
Sbjct: 405 AKGLIK 410


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,447,310
Number of Sequences: 37544
Number of extensions: 274713
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)