Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P05
         (980 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028804-1|ABI34185.1|  917|Drosophila melanogaster RE64551p pro...    89   7e-18
AE014134-2492|AAO41195.2|  752|Drosophila melanogaster CG4215-PC...    89   7e-18
AE014134-2491|AAF53392.2|  917|Drosophila melanogaster CG4215-PA...    89   7e-18
U17893-1|AAA62406.1|  913|Drosophila melanogaster Spellchecker1 ...    83   4e-16

>BT028804-1|ABI34185.1|  917|Drosophila melanogaster RE64551p
           protein.
          Length = 917

 Score = 89.4 bits (212), Expect = 7e-18
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
 Frame = +3

Query: 300 LNLDSVQQQAFVIFFNSLPDKPPTTVRVFDRNDYYSIHGID-ATTAAREVFSSVANIKRM 476
           LN+D+  ++ F+ F   L +KP TTVR FD  D Y++HG D     A+ V+ S A I  +
Sbjct: 14  LNMDTNARRNFIRFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGAL 73

Query: 477 GVDPNR--LDYLVLSKGNFEILIKKLLLVRRYRVEIYVADGSIKGCDWSLKY 626
             D  +  L ++ +SKGNFE+ +++LLLVR YRVE+YV + S    DW ++Y
Sbjct: 74  LPDDKKETLQFVSMSKGNFELAVRELLLVRNYRVEVYVKNSS----DWEIEY 121


>AE014134-2492|AAO41195.2|  752|Drosophila melanogaster CG4215-PC,
           isoform C protein.
          Length = 752

 Score = 89.4 bits (212), Expect = 7e-18
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
 Frame = +3

Query: 300 LNLDSVQQQAFVIFFNSLPDKPPTTVRVFDRNDYYSIHGID-ATTAAREVFSSVANIKRM 476
           LN+D+  ++ F+ F   L +KP TTVR FD  D Y++HG D     A+ V+ S A I  +
Sbjct: 14  LNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGAL 73

Query: 477 GVDPNR--LDYLVLSKGNFEILIKKLLLVRRYRVEIYVADGSIKGCDWSLKY 626
             D  +  L ++ +SKGNFE+ +++LLLVR YRVE+YV + S    DW ++Y
Sbjct: 74  LPDDKKETLQFVSMSKGNFELAVRELLLVRNYRVEVYVKNSS----DWEIEY 121


>AE014134-2491|AAF53392.2|  917|Drosophila melanogaster CG4215-PA,
           isoform A protein.
          Length = 917

 Score = 89.4 bits (212), Expect = 7e-18
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
 Frame = +3

Query: 300 LNLDSVQQQAFVIFFNSLPDKPPTTVRVFDRNDYYSIHGID-ATTAAREVFSSVANIKRM 476
           LN+D+  ++ F+ F   L +KP TTVR FD  D Y++HG D     A+ V+ S A I  +
Sbjct: 14  LNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGAL 73

Query: 477 GVDPNR--LDYLVLSKGNFEILIKKLLLVRRYRVEIYVADGSIKGCDWSLKY 626
             D  +  L ++ +SKGNFE+ +++LLLVR YRVE+YV + S    DW ++Y
Sbjct: 74  LPDDKKETLQFVSMSKGNFELAVRELLLVRNYRVEVYVKNSS----DWEIEY 121


>U17893-1|AAA62406.1|  913|Drosophila melanogaster Spellchecker1
           protein.
          Length = 913

 Score = 83.4 bits (197), Expect = 4e-16
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
 Frame = +3

Query: 330 FVIFFNSLPDKPPTTVRVFDRNDYYSIHGID-ATTAAREVFSSVANIKRMGVDPNR--LD 500
           F+ F   L +KP TTVR FD  D Y++HG D     A+ V+ S A I  +  D  +  L 
Sbjct: 20  FIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDKKETLQ 79

Query: 501 YLVLSKGNFEILIKKLLLVRRYRVEIYVADGSIKGCDWSLKY 626
           ++ +SKGNFE+ +++LLLVR YRVE+YV + S    DW ++Y
Sbjct: 80  FVSMSKGNFELAVRELLLVRNYRVEVYVKNSS----DWEIEY 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,744,205
Number of Sequences: 53049
Number of extensions: 488841
Number of successful extensions: 1126
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4935487923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)