Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P03
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29381-2|AAA68750.2|  174|Caenorhabditis elegans Hypothetical pr...   155   5e-38
Z75550-4|CAA99923.2|  335|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    28   8.0  

>U29381-2|AAA68750.2|  174|Caenorhabditis elegans Hypothetical
           protein F35D11.4 protein.
          Length = 174

 Score =  155 bits (375), Expect = 5e-38
 Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 3/173 (1%)
 Frame = +3

Query: 126 RNVEIKGKIRDYDKICKVAEELSGGPPTLIKQNDIFYKVNNGRLKMRFYADSAAT---LV 296
           RNVEIK K+++ D+  + A E+SG  PT++KQ+DIFY+  NGRLKMR   ++      L+
Sbjct: 3   RNVEIKAKVQNLDETVRRAVEISGKQPTILKQHDIFYESPNGRLKMRSVEENGVAHTELI 62

Query: 297 RYDRSKEKGPKLANYELLQFTTAEYEKAKLLDDMLKKCLGAQGRVVKERKLYMVGQTRIH 476
            YDRS   GPKL+N+      +   +  KL    L+  +G +G V K R L + GQTRIH
Sbjct: 63  WYDRSDVAGPKLSNFNKFDVPSEVLDALKL---SLQSSMGVKGEVKKTRTLVLHGQTRIH 119

Query: 477 IDTVKDLGHFMELEVVLAPEQTVEDGQKIASELQKKLGVQNVDLIDNAYVDML 635
           ID V  LG FMELEV L+PE+T E G+KIA E+++ L V   DL+  AY+DML
Sbjct: 120 IDRVDGLGDFMELEVCLSPEETPEHGEKIAHEIRELLAVPETDLLTGAYMDML 172


>Z75550-4|CAA99923.2|  335|Caenorhabditis elegans Hypothetical
           protein T22C1.6 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 34/156 (21%), Positives = 67/156 (42%)
 Frame = +3

Query: 114 QQKMRNVEIKGKIRDYDKICKVAEELSGGPPTLIKQNDIFYKVNNGRLKMRFYADSAATL 293
           + + +N E+K K+ DYDK+ KV ++L+     L + N I  +    + K+          
Sbjct: 32  ESEKQNAELKIKVLDYDKVVKV-KDLT--EKKLERNNQILLRTEEAKSKLEELC-RGLQK 87

Query: 294 VRYDRSKEKGPKLANYELLQFTTAEYEKAKLLDDMLKKCLGAQGRVVKERKLYMVGQTRI 473
             +   +E   K+   E+ +    E  K  L D  ++K + A+GR   +    +    + 
Sbjct: 88  ANHQTREEACAKMKKLEVERGLAVEQLKVTLKD--IEKTM-AEGRSKSDS---LAEDNKK 141

Query: 474 HIDTVKDLGHFMELEVVLAPEQTVEDGQKIASELQK 581
             +   ++GH  E E +   +Q ++  +K   E  K
Sbjct: 142 LSEKFSEIGHQYE-EKMKVIDQQIQKKEKYWEEYGK 176


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -3

Query: 643 SFSNIST*ALSIRSTFCTPSFFWSSEAIF*PSSTVCSGANTTSS 512
           S S+ S  A S  ST  TPS   S+  +  PSST  S + TTS+
Sbjct: 662 SESSTSAVASSTSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSA 705


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -3

Query: 643 SFSNIST*ALSIRSTFCTPSFFWSSEAIF*PSSTVCSGANTTSS 512
           S S+ S  A S  ST  TPS   S+  +  PSST  S + TTS+
Sbjct: 662 SESSTSAVASSTSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSA 705


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,623,027
Number of Sequences: 27780
Number of extensions: 372352
Number of successful extensions: 938
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)