Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_P02
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 33 0.42
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.56
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.74
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.3
07_03_0560 + 19479597-19480667 30 3.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.0
07_03_1136 + 24218601-24218734,24218769-24219906 29 3.9
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.2
10_08_0362 + 17211788-17212300,17213342-17213623,17214071-17214139 29 6.9
04_04_0009 + 22134160-22134696 29 6.9
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.9
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 6.9
02_05_1277 - 35408097-35409080 28 9.1
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXV 568
PPPP G GP P PPP L GG V
Sbjct: 929 PPPPPPPGKPGGPPPPPPPPGSLPRNLAGGDKV 961
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXVSPPXRGXXXXPXKMG 613
PPPP P P PPPK G PP +G P G
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +2
Query: 461 KKXPPPPGXXGXFXGPXPL--PPPKXPXXXXLXGGXXVSPPXRGXXXXPXKMG 613
K PPPP G P P PP P GG PP G P G
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.74
Identities = 34/142 (23%), Positives = 36/142 (25%), Gaps = 8/142 (5%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXVS--PPXRGXXXXPXKMGXXXXXXXXXX 643
PP PG F P P PPP G S PP P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAP 712
Query: 644 XPXKXPXP---KKXPXFXFFKXXAPPPXKX*KKNXXXXXXXXXXXXXKKXNPXVPP---P 805
P P P P P P K+N K P PP P
Sbjct: 713 PPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAP 772
Query: 806 XNPXXXPPXLTHXGXKXKXXPP 871
P PP G + PP
Sbjct: 773 KPPGTVPPPPPLHGASGRPHPP 794
Score = 29.1 bits (62), Expect = 5.2
Identities = 32/141 (22%), Positives = 33/141 (23%), Gaps = 7/141 (4%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXVSPPXRGXXXXPXKM-------GXXXXX 628
PPP G F P P PPP P PP P +
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPI 611
Query: 629 XXXXXXPXKXPXPKKXPXFXFFKXXAPPPXKX*KKNXXXXXXXXXXXXXKKXNPXVPPPX 808
P P P P PPP N K P PPP
Sbjct: 612 LPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPP-PPPP 670
Query: 809 NPXXXPPXLTHXGXKXKXXPP 871
P T K PP
Sbjct: 671 PPRSSSRTPTGAATSSKGPPP 691
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/82 (25%), Positives = 23/82 (28%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXVSPPXRGXXXXPXKMGXXXXXXXXXXXP 649
PPP G F P P PPP P PP + P +M
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGV 101
Query: 650 XKXPXPKKXPXFXFFKXXAPPP 715
P P APPP
Sbjct: 102 NSSQPPPPPPPPPSPPPSAPPP 123
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.9 bits (64), Expect = 3.0
Identities = 32/109 (29%), Positives = 33/109 (30%)
Frame = -2
Query: 788 GFXFXXGGGVPXRXRXGGFFFXFXGGGXPFX*KTXKXGXFWGGGXXGAXXEKXXFLGVXP 609
GF GGG+ GG GGG K G F GG G E G
Sbjct: 72 GFGGGGGGGLGGGGGFGGG--GGAGGGGGLGGGGGKGGGFGGGVGGGGGGEGGGLGG--- 126
Query: 608 FXGXXXXXPXGGGKPXPPPXXXGXXXFXGGXGXGXXKXXPXXXGGGGXF 462
G GGG G GG G G GGGG F
Sbjct: 127 -GGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGF 174
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXVSPPXRGXXXXPXKMG 613
PPP G G P P P P + GG P RG P G
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRG 1234
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 584 PXGGGKPXPPPXXXGXXXFXGGXGXGXXKXXPXXXGGGG 468
P GGG P P G GG G G P GGGG
Sbjct: 92 PGGGGAPGPL-GGGGARPPGGGGGGGPPSLPPGAGGGGG 129
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 623 LGVXPFXGXXXXXPXGGGKPXPPPXXXGXXX--FXGGXGXGXXKXXPXXXGGGG 468
LG+ P G P GGG PP G G G G P GGGG
Sbjct: 88 LGLPP-GGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
Score = 28.3 bits (60), Expect = 9.1
Identities = 31/102 (30%), Positives = 31/102 (30%), Gaps = 1/102 (0%)
Frame = -2
Query: 770 GGGVPXRXRXGGFFFXFXGGGXPFX*KTXKXGXFWGGGXXGAXXEKXXFLGVXPFXGXXX 591
GGG P R GG GGG GGG GA G G
Sbjct: 140 GGGAPRRVLGGG------GGGGALARPP-------GGGRGGALGRPPGGGGGGGGPGRAP 186
Query: 590 XXPXGGGKPXPPPXXXGXXX-FXGGXGXGXXKXXPXXXGGGG 468
GGG P P G GG G G GGGG
Sbjct: 187 GGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGG 228
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXV 568
PPPP G GP P PP L GG V
Sbjct: 624 PPPPPPPGKPGGPPPPPPRPGSLPRNLAGGDKV 656
>10_08_0362 + 17211788-17212300,17213342-17213623,17214071-17214139
Length = 287
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 473 PPPGXXGXFXGPXPLPPPKXPXXXXLXGG 559
PPPG G P P PPP P + G
Sbjct: 212 PPPGSAGKLRSPLP-PPPNDPAAARMNSG 239
>04_04_0009 + 22134160-22134696
Length = 178
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -2
Query: 578 GGGKPXPPPXXXGXXXFXGGXGXGXXKXXPXXXGGGG 468
GGG PPP GG G + GGGG
Sbjct: 58 GGGSTAPPPPPPSSSGKSGGGGGSNIREAAASGGGGG 94
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 473 PPPGXXGXFXGPXPLPPPKXPXXXXLXGGXXVSPPXRG 586
P P G GP P PPP P G PP G
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXPXXXXLXGG 559
PPPP + P P PPP P GG
Sbjct: 114 PPPPHLLHYYGHPPPPPPPPPPFKGDHYGG 143
>02_05_1277 - 35408097-35409080
Length = 327
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 470 PPPPGXXGXFXGPXPLPPPKXP 535
PPPP P P PPP P
Sbjct: 64 PPPPAQPPVLAAPAPAPPPPQP 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,600,777
Number of Sequences: 37544
Number of extensions: 275937
Number of successful extensions: 1230
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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