Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P01
         (956 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2962|AAF53692.2|  417|Drosophila melanogaster CG10338-P...   166   5e-41

>AE014134-2962|AAF53692.2|  417|Drosophila melanogaster CG10338-PA
           protein.
          Length = 417

 Score =  166 bits (403), Expect = 5e-41
 Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 8/156 (5%)
 Frame = +2

Query: 248 EIIVKEKYGSSSTERIYIKPPEQAMVV--------VYDETKINYFRNWFTNVFLPKGYPD 403
           +I  +E+YG    E +Y+ P +Q+ +V        +  + K   FR     VFLPKGYPD
Sbjct: 2   KIHFREQYGRKGEEILYVTPADQSNIVRVPLRGDKLVIQEKFLLFRV-LQKVFLPKGYPD 60

Query: 404 SVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTWVIKDGCGHL 583
           SVS DY+AYQIWDTAQAFCSTI GTL T  +L+G+GVG       +AT TW++K+G GH+
Sbjct: 61  SVSEDYAAYQIWDTAQAFCSTICGTLCTHAILKGIGVGSENINAFSATATWILKEGSGHV 120

Query: 584 GRILFAFTRGTCLDAYSKKWRLYADILNDAAMCIEI 691
           GRI+FA+ +G+ LD  SKKWRL AD LND AM IEI
Sbjct: 121 GRIVFAWWQGSQLDVDSKKWRLRADFLNDLAMGIEI 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,917,849
Number of Sequences: 53049
Number of extensions: 647931
Number of successful extensions: 1472
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)