Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_O24
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   9.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 890 DFVNAAISTLGHSLHFL 840
           DF+ A I TLG++L FL
Sbjct: 326 DFIAAGIHTLGNTLVFL 342


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 704 AVRSISTDGLLWGAAKLVPLAYGIHK 781
           AV  I+   LL G    VP++ G+H+
Sbjct: 142 AVAGIAVVWLLAGLISFVPISLGLHR 167



 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 462 SEVILLDDSKVSTRTCRL 409
           +E ++LDDSK    TC L
Sbjct: 169 NEPVVLDDSKEEHPTCAL 186


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 227 WLDRNVYNDAEKAYYESLSKMDSV 298
           W DR + N  +K   + +S  D+V
Sbjct: 340 WCDRVLLNPTDKMLVQDISSPDAV 363


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,069
Number of Sequences: 438
Number of extensions: 3985
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)