Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O22
(932 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0287 - 2152179-2152424,2153300-2153339,2153612-2153831,215... 157 1e-38
12_02_0419 + 18916995-18917090,18917703-18917851,18917873-189180... 137 1e-32
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 136 3e-32
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 109 2e-24
01_05_0449 - 22349299-22349310,22349842-22350011,22350232-223503... 47 2e-05
05_01_0163 - 1125364-1125422,1126062-1126205,1126640-1126756,112... 41 0.001
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 31 1.7
01_06_1488 + 37716986-37717076,37717424-37717558,37717755-377178... 30 2.3
09_01_0023 - 434250-434408,435614-435684,436053-436143,436208-43... 30 3.0
02_04_0256 + 21331396-21332268 30 3.0
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 29 4.0
>12_01_0287 -
2152179-2152424,2153300-2153339,2153612-2153831,
2153917-2153995,2154087-2154155,2154237-2154329,
2154411-2154477,2154579-2154640,2154729-2154774,
2155359-2155404,2155490-2155547,2155717-2155755,
2155849-2155920,2156067-2156158,2157036-2157135
Length = 442
Score = 157 bits (381), Expect = 1e-38
Identities = 81/171 (47%), Positives = 106/171 (61%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
E+ +EC + I KL GI SGD+KKL++AG +T + KK L IKG+SEAK DKI
Sbjct: 22 EEEEECF-ESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLTGIKGLSEAKVDKI 80
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
A KL+ GF T ++ KR ++++TTGS+ LD+LL FR+GKT
Sbjct: 81 CEAAEKLLSQGFITGSDLLIKRKSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKT 140
Query: 670 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRYVEGALAV 822
QL HTL V+ QLPI GG GK YIDTEGTF PER++ +A+R+ A AV
Sbjct: 141 QLAHTLCVSAQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMDANAV 191
>12_02_0419 +
18916995-18917090,18917703-18917851,18917873-18918063,
18918178-18918269,18918456-18918550,18918920-18919049,
18919178-18919219
Length = 264
Score = 137 bits (332), Expect = 1e-32
Identities = 71/151 (47%), Positives = 94/151 (62%)
Frame = +1
Query: 349 LEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEASKLVPMGFT 528
L+ GI+ + K+ E G + A ++ I K LA ASKLVP+GFT
Sbjct: 64 LQIKGISEAKVDKIIEGGKEHSNAFLLASEQSFIC----EVLSVHKCLA-ASKLVPLGFT 118
Query: 529 TATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLP 708
+A++ H +R EIIQ+TTGS+ELD++L FR+GKTQLCHTL VTCQLP
Sbjct: 119 SASQLHAQRLEIIQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLP 178
Query: 709 IEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
++Q GGEGK +YID EGTF P+RLL +A R+
Sbjct: 179 LDQGGGEGKALYIDAEGTFRPQRLLQIADRF 209
Score = 69.7 bits (163), Expect = 3e-12
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 322 ECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKILAEA 501
E GP I +L+ +GI + D+KKL++AG TVESV Y+P+K L+ IKGISEAK DKI+ E
Sbjct: 22 EHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVVYSPRKDLLQIKGISEAKVDKII-EG 80
Query: 502 SKLVPMGFTTATE 540
K F A+E
Sbjct: 81 GKEHSNAFLLASE 93
>11_06_0395 +
23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 136 bits (328), Expect = 3e-32
Identities = 78/164 (47%), Positives = 101/164 (61%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
++ E GP I +L+ +GI + D+KKL+++G +TVESVAY P+K L+ IKGISEAK DKI
Sbjct: 15 QEEGEHGPFPIEQLQASGIAALDVKKLKDSGLYTVESVAYTPRKDLLQIKGISEAKVDKI 74
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
+ EA K V + F Q + TGS FR+GKT
Sbjct: 75 V-EAGKNVLLVIIEQFYFDQTGG----IETGS---------------ITEIYGEFRSGKT 114
Query: 670 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
QLCHTL VTCQLP++Q GGEGK +YID EGTF P+RLL +A R+
Sbjct: 115 QLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRF 158
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 109 bits (263), Expect = 2e-24
Identities = 58/132 (43%), Positives = 78/132 (59%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
E+ +EC + I KL GI SGD+KKL++AG +T + KK L IKG+SEAK DKI
Sbjct: 22 EEEEECF-ESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLTGIKGLSEAKVDKI 80
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
A KL+ GF T ++ KR ++++TTGS+ LD LL FR+GKT
Sbjct: 81 CEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGGGIETLCITEAFGEFRSGKT 140
Query: 670 QLCHTLAVTCQL 705
QL HTL V+ Q+
Sbjct: 141 QLAHTLCVSTQI 152
>01_05_0449 -
22349299-22349310,22349842-22350011,22350232-22350303,
22351740-22351806,22352516-22352647,22352844-22353070,
22353150-22353359,22353565-22353687,22353971-22354075,
22354324-22354435
Length = 409
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 685 LAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRYVEGALAVFXYHXH 840
LA+ Q+P+E G GK +YIDTEG+F ER+ +A+ + L F H H
Sbjct: 163 LAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYFP-HCH 213
>05_01_0163 -
1125364-1125422,1126062-1126205,1126640-1126756,
1126835-1126926,1127942-1128022,1128323-1128378,
1128496-1128559,1128645-1128748,1129578-1129724,
1129876-1129989,1130070-1130153
Length = 353
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 661 GKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQR 798
GKTQ C LA+ LP G G+ +YIDTE F R++ + ++
Sbjct: 112 GKTQFCLKLALLATLPECYGGLNGRVLYIDTESKFSSRRMIEIGEK 157
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 304 LDEDADECGPQLISKLEGNGITSG-DIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKA 480
+D D D+C L+ +L+G GI+S D+ +++ + V+ A ++ + + A
Sbjct: 898 VDGDLDQCEHGLLCRLDGGGISSDEDVSAIQKIWHCLVQQTAALTNPLRHCLR-LVQCIA 956
Query: 481 DKILAEASKLVPMGFT 528
+ KL+P+G+T
Sbjct: 957 AAVSPTFLKLLPIGWT 972
>01_06_1488 +
37716986-37717076,37717424-37717558,37717755-37717831,
37717934-37718181,37718503-37718559,37718665-37718800,
37718944-37719001,37719110-37719195,37719270-37719326,
37719537-37719557,37720553-37720954,37721500-37721647,
37721940-37722036,37724065-37724202,37724496-37724598,
37724792-37724828,37724905-37725014,37725141-37725164
Length = 674
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +1
Query: 658 TGKTQLCHTLAVTCQLPIEQS----GGEGK-CMYIDTEGTFXPERLLAVAQRYV 804
+GK+QL T AV C LP E GG GK MY+D + F RL + + +
Sbjct: 448 SGKSQLLLTAAVQCILPKEWKGTYFGGLGKVVMYLDLDCRFDVLRLAQILRNRI 501
>09_01_0023 -
434250-434408,435614-435684,436053-436143,436208-436321,
436523-436657,436832-436913,437095-437195,437425-437490
Length = 272
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +1
Query: 571 LTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYID 750
L TG + +D LL +GKTQ+C C + G MY+D
Sbjct: 50 LPTGLQGVDALLGGGLRQGQLTEITGQSSSGKTQVC-----LCSASHVAARQLGVVMYLD 104
Query: 751 TEGTFXPERLLAVAQRY 801
T +F P R+ + +
Sbjct: 105 TSNSFSPSRIARIVDGF 121
>02_04_0256 + 21331396-21332268
Length = 290
Score = 29.9 bits (64), Expect = 3.0
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 568 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQL-PIEQSGGEGKCMY 744
+L+ G LDRLL +GKTQLC LA+ L P+ S C++
Sbjct: 42 KLSLGCPVLDRLLSGGLPPASVTEIAGESASGKTQLCLQLALLAPLSPLSAS-----CLF 96
Query: 745 IDTEGTFXPERLLAVAQR 798
+ ++ F RL +A +
Sbjct: 97 LHSDLPFPLRRLRGLAPK 114
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 824 NTASAPSTYRCATASSLSGXNVPSVSMYMHLPSPP 720
+++SAPST C++ ++ S +P +S +P PP
Sbjct: 277 SSSSAPSTPSCSSDTAASRSRLPELSKLPPIPPPP 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,332,039
Number of Sequences: 37544
Number of extensions: 375583
Number of successful extensions: 796
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -