Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O22
(932 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41342-1|AAA64873.1| 336|Drosophila melanogaster protein ( Dros... 200 3e-51
D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein h... 200 3e-51
D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein. 200 3e-51
AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA... 200 3e-51
BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p pro... 154 1e-37
AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB... 154 1e-37
AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D pr... 48 1e-05
AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p pro... 48 1e-05
AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-P... 48 1e-05
AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B pr... 34 0.32
AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA... 34 0.32
AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p pro... 33 0.74
>L41342-1|AAA64873.1| 336|Drosophila melanogaster protein (
Drosophila melanogaster(clone pDmR2210) RAD51 homolog
gene, complete cds. ).
Length = 336
Score = 200 bits (487), Expect = 3e-51
Identities = 96/164 (58%), Positives = 118/164 (71%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 670 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TF PERL A+AQRY
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRY 175
>D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein
homologue protein.
Length = 336
Score = 200 bits (487), Expect = 3e-51
Identities = 96/164 (58%), Positives = 118/164 (71%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 670 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TF PERL A+AQRY
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRY 175
>D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein.
Length = 336
Score = 200 bits (487), Expect = 3e-51
Identities = 96/164 (58%), Positives = 118/164 (71%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 670 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TF PERL A+AQRY
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRY 175
>AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA,
isoform A protein.
Length = 336
Score = 200 bits (487), Expect = 3e-51
Identities = 96/164 (58%), Positives = 118/164 (71%)
Frame = +1
Query: 310 EDADECGPQLISKLEGNGITSGDIKKLEEAGYHTVESVAYAPKKWLITIKGISEAKADKI 489
E+ +E GP ++KL G IT+ DIK L++A HTVESVA A KK L+ I G+ K ++I
Sbjct: 12 EEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQI 71
Query: 490 LAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKT 669
+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL FR GKT
Sbjct: 72 ITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKT 131
Query: 670 QLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
QLCHTLAVTCQLPI Q GGEGKCMYIDTE TF PERL A+AQRY
Sbjct: 132 QLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRY 175
>BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p
protein.
Length = 284
Score = 154 bits (374), Expect = 1e-37
Identities = 71/118 (60%), Positives = 86/118 (72%)
Frame = +1
Query: 448 ITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXX 627
+ I G+ K ++I+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL
Sbjct: 1 MAIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETG 60
Query: 628 XXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
FR GKTQLCHTLAVTCQLPI Q GGEGKCMYIDTE TF PERL A+AQRY
Sbjct: 61 SITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRY 118
>AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB,
isoform B protein.
Length = 279
Score = 154 bits (374), Expect = 1e-37
Identities = 71/118 (60%), Positives = 86/118 (72%)
Frame = +1
Query: 448 ITIKGISEAKADKILAEASKLVPMGFTTATEFHQKRAEIIQLTTGSKELDRLLXXXXXXX 627
+ I G+ K ++I+ EA+KLVP+GF +A F+Q RA+++QL+TGSKELD+LL
Sbjct: 1 MAIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETG 60
Query: 628 XXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYIDTEGTFXPERLLAVAQRY 801
FR GKTQLCHTLAVTCQLPI Q GGEGKCMYIDTE TF PERL A+AQRY
Sbjct: 61 SITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRY 118
>AY257540-1|AAP13056.1| 270|Drosophila melanogaster spindle D
protein.
Length = 270
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 568 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 747
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 748 DTEGTFXPERLLAVA 792
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>AY071162-1|AAL48784.1| 270|Drosophila melanogaster RE19845p
protein.
Length = 270
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 568 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 747
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 748 DTEGTFXPERLLAVA 792
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>AE014297-4083|AAN14399.1| 270|Drosophila melanogaster CG31069-PA
protein.
Length = 270
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 568 QLTTGSKELDRLLXXXXXXXXXXXXXXXFRTGKTQLCHTLAVTCQLPIEQSGGEGKCMYI 747
++ TG K LD TGKTQ+C L + Q+P G EG ++I
Sbjct: 45 KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFI 104
Query: 748 DTEGTFXPERLLAVA 792
DT F P+RL+ +A
Sbjct: 105 DTRQDFHPDRLMGLA 119
>AF069531-1|AAC42663.1| 341|Drosophila melanogaster spindle B
protein.
Length = 341
Score = 33.9 bits (74), Expect = 0.32
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 661 GKTQLCHTLAVTCQLPIEQSGGEGKCM-YIDTEGTFXPERLLAVAQ 795
GKTQL L++ QLP E GG GK + YI TE +F RLL +++
Sbjct: 118 GKTQLLLQLSLCVQLPREL-GGLGKGVAYICTESSFPARRLLQMSK 162
>AE014297-1844|AAF55050.1| 341|Drosophila melanogaster CG3325-PA
protein.
Length = 341
Score = 33.9 bits (74), Expect = 0.32
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 661 GKTQLCHTLAVTCQLPIEQSGGEGKCM-YIDTEGTFXPERLLAVAQ 795
GKTQL L++ QLP E GG GK + YI TE +F RLL +++
Sbjct: 118 GKTQLLLQLSLCVQLPREL-GGLGKGVAYICTESSFPARRLLQMSK 162
>AY070920-1|AAL48542.1| 341|Drosophila melanogaster RE02671p
protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.74
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 661 GKTQLCHTLAVTCQLPIEQSGGEGKCM-YIDTEGTFXPERLLAVAQ 795
GKT+L L++ QLP E GG GK + YI TE +F RLL +++
Sbjct: 118 GKTELLLQLSLCVQLPREL-GGLGKGVAYICTESSFPARRLLQMSK 162
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,499,818
Number of Sequences: 53049
Number of extensions: 639901
Number of successful extensions: 1369
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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