Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_O17
         (905 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94910-1|CAA64397.1|  261|Homo sapiens ERp28 protein.                  97   1e-19
CR541667-1|CAG46468.1|  261|Homo sapiens C12orf8 protein.              97   1e-19
BC101495-1|AAI01496.1|  261|Homo sapiens endoplasmic reticulum p...    97   1e-19
BC101493-1|AAI01494.1|  261|Homo sapiens endoplasmic reticulum p...    97   1e-19

>X94910-1|CAA64397.1|  261|Homo sapiens ERp28 protein.
          Length = 261

 Score = 96.7 bits (230), Expect = 1e-19
 Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 FVFLAVLSASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHDAFVALAKDS 362
           F+ L+         + G++ LD ++F KVI K +  LVKFD  +PYG+K D F  LA++S
Sbjct: 21  FLLLSAPHGGSGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENS 80

Query: 363 KDVDELLIAEVGVKDYGEKDNEVLAKKYGATKDNFPVVRLFLKGKNE-PIPF 515
              D+LL+AEVG+ DYG+K N  L++KY   K+++PV  LF  G  E P+P+
Sbjct: 81  ASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPY 132


>CR541667-1|CAG46468.1|  261|Homo sapiens C12orf8 protein.
          Length = 261

 Score = 96.7 bits (230), Expect = 1e-19
 Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 FVFLAVLSASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHDAFVALAKDS 362
           F+ L+         + G++ LD ++F KVI K +  LVKFD  +PYG+K D F  LA++S
Sbjct: 21  FLLLSAPHGGSGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENS 80

Query: 363 KDVDELLIAEVGVKDYGEKDNEVLAKKYGATKDNFPVVRLFLKGKNE-PIPF 515
              D+LL+AEVG+ DYG+K N  L++KY   K+++PV  LF  G  E P+P+
Sbjct: 81  ASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPY 132


>BC101495-1|AAI01496.1|  261|Homo sapiens endoplasmic reticulum
           protein 29 protein.
          Length = 261

 Score = 96.7 bits (230), Expect = 1e-19
 Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 FVFLAVLSASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHDAFVALAKDS 362
           F+ L+         + G++ LD ++F KVI K +  LVKFD  +PYG+K D F  LA++S
Sbjct: 21  FLLLSAPHGGSGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENS 80

Query: 363 KDVDELLIAEVGVKDYGEKDNEVLAKKYGATKDNFPVVRLFLKGKNE-PIPF 515
              D+LL+AEVG+ DYG+K N  L++KY   K+++PV  LF  G  E P+P+
Sbjct: 81  ASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPY 132


>BC101493-1|AAI01494.1|  261|Homo sapiens endoplasmic reticulum
           protein 29, isoform 1 precursor protein.
          Length = 261

 Score = 96.7 bits (230), Expect = 1e-19
 Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = +3

Query: 183 FVFLAVLSASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHDAFVALAKDS 362
           F+ L+         + G++ LD ++F KVI K +  LVKFD  +PYG+K D F  LA++S
Sbjct: 21  FLLLSAPHGGSGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENS 80

Query: 363 KDVDELLIAEVGVKDYGEKDNEVLAKKYGATKDNFPVVRLFLKGKNE-PIPF 515
              D+LL+AEVG+ DYG+K N  L++KY   K+++PV  LF  G  E P+P+
Sbjct: 81  ASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPY 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,128,021
Number of Sequences: 237096
Number of extensions: 1345308
Number of successful extensions: 2688
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2688
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)