Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_O17
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   5.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   6.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   8.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 441 KYGATKDNFPVVRLFLKGKNEPIPFD 518
           KY +    FP   L  KGK E +P++
Sbjct: 590 KYSSQPYGFPERLLLPKGKKEGMPYN 615


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 441 KYGATKDNFPVVRLFLKGKNEPIPFD 518
           KY +    FP   L  KGK E +P++
Sbjct: 590 KYSSQPYGFPERLLLPKGKKEGMPYN 615


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 462 NFPVVRLFLKGKNEPIPFDDSQGFH 536
           +F  + L L   NEP+  DDS+  H
Sbjct: 157 SFVPISLGLHRANEPVVLDDSKEEH 181


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 283 SNLFITLLNEISSNSTEPVDVFAREADST 197
           S+LF+T+  ++     +  D FA  AD T
Sbjct: 176 SSLFVTIAVDVRDTEDKCKDTFAYIADVT 204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,360
Number of Sequences: 438
Number of extensions: 3413
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)