Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O12
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 35 0.094
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 34 0.12
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 34 0.12
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.88
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.88
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.88
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 26 0.89
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 2.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 3.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical pr... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 8.2
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 8.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.2
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 34.7 bits (76), Expect = 0.094
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 499 PXXXGXGFXGGGXGXGPKXXPPXPXGGGV 413
P G G GGG GP PP P GGGV
Sbjct: 10 PMYGGAGGGGGGPPRGPPQQPPQPQGGGV 38
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 375 PGGGXGXFXXXKKTPPPXGXGGXFXGPXPXPPPKNPXPXXLGXGXGFXXPXXG 533
P G G + G GG + PPP P P +G G G+ P G
Sbjct: 33 PSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +3
Query: 375 PGGGXGXFXXXKKTPPPXGXGGXFXGPXPXPPPKNPXPXXLGXGXGFXXPXXG 533
P G G + G GG + PPP P P +G G G+ P G
Sbjct: 33 PSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 523 GXXNPXPXPXXXGXGFXGGGXGXGPK-XXPPXPXGGG 416
G P P P G G GGG G G PP P GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 523 GXXNPXPXPXXXGXGFXGGGXGXGPK-XXPPXPXGGG 416
G P P P G G GGG G G PP P GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.88
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +3
Query: 363 FFXXPGGGXGXFXXXKKTPPPXGXGGXFXGPXPXPP---PKNPXPXXLGXGXGFXXPXXG 533
F GGG G PPP G GG P P P+ P G G G P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.88
Identities = 28/114 (24%), Positives = 33/114 (28%), Gaps = 2/114 (1%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKPXP--PXXGXGGGVXXPPXGGXXFXPXXGXXPXKKFFLX 589
PPPP G PP P P G PP G P G P +
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 295
Query: 590 GPPXXXNPKKXXXGGFXQXXXXXXXXXXXXPPXXGGXXPPELKKXXGFPXKXPP 751
PP P+ G PP G PP ++ P + PP
Sbjct: 296 SPPPPPPPRGSPPTG----SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.88
Identities = 28/114 (24%), Positives = 33/114 (28%), Gaps = 2/114 (1%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKPXP--PXXGXGGGVXXPPXGGXXFXPXXGXXPXKKFFLX 589
PPPP G PP P P G PP G P G P +
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 316
Query: 590 GPPXXXNPKKXXXGGFXQXXXXXXXXXXXXPPXXGGXXPPELKKXXGFPXKXPP 751
PP P+ G PP G PP ++ P + PP
Sbjct: 317 SPPPPPPPRGSPPTG----SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.88
Identities = 28/114 (24%), Positives = 33/114 (28%), Gaps = 2/114 (1%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKPXP--PXXGXGGGVXXPPXGGXXFXPXXGXXPXKKFFLX 589
PPPP G PP P P G PP G P G P +
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 301
Query: 590 GPPXXXNPKKXXXGGFXQXXXXXXXXXXXXPPXXGGXXPPELKKXXGFPXKXPP 751
PP P+ G PP G PP ++ P + PP
Sbjct: 302 SPPPPPPPRGSPPTG----SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 351
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 25.8 bits (54), Expect(2) = 0.89
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 523 GXXNPXPXPXXXGXGFXGGGXGXG 452
G P P P G G GGG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG 73
Score = 24.2 bits (50), Expect(2) = 0.89
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 472 GGGXGXGPKXXPPXPXGGG 416
GGG G G PP P GG
Sbjct: 102 GGGCGGGCAPPPPPPACGG 120
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 534 PPXGGXKTPPPXPXXGGXGFXGGXXXXXXKXXPXXPGGGG 415
PP GG PPP G GG P PG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 534 PPXGGXKTPPPXPXXGGXGFXGGXXXXXXKXXPXXPGGGG 415
PP GG PPP G GG P PG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 381 GGXGXFXXXKKTPPPXGXGGXFXGPXPXPPP 473
G G PPP G GG F P P PPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGG-FMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 381 GGXGXFXXXKKTPPPXGXGGXFXGPXPXPPP 473
G G PPP G GG F P P PPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGG-FMPPPPPPPP 681
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKPXPPXXGXGGGVXXPPXGGXXFXPXXGXXP 568
PPPP G PP P PP G GG PP G F P P
Sbjct: 759 PPPPPPPGGC-------PPPPPPPPPGGFKGGPPPPPPPG-MFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 534 PPXGGXKTPPPXPXXGGXGFXGG 466
PP GG PPP P G GF GG
Sbjct: 763 PPPGGCPPPPPPPPPG--GFKGG 783
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPXGXGGXFXGPXPXPPP 473
PPP GG GP P PPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKP---XPPXXGXGGGVXXPPXGGXXFXPXXGXXPXKKFFL 586
PPPP G PP P PP G G PP GG P P F
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGG---CPPPPPPPPPGGFK 781
Query: 587 XGPPXXXNP 613
GPP P
Sbjct: 782 GGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKPXPPXXGXGGGVXXPPXGGXXFXPXXGXXP 568
PPPP G PP P PP G GG PP G F P P
Sbjct: 759 PPPPPPPGGC-------PPPPPPPPPGGFKGGPPPPPPPG-MFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 534 PPXGGXKTPPPXPXXGGXGFXGG 466
PP GG PPP P G GF GG
Sbjct: 763 PPPGGCPPPPPPPPPG--GFKGG 783
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPXGXGGXFXGPXPXPPP 473
PPP GG GP P PPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKP---XPPXXGXGGGVXXPPXGGXXFXPXXGXXPXKKFFL 586
PPPP G PP P PP G G PP GG P P F
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGG---CPPPPPPPPPGGFK 781
Query: 587 XGPPXXXNP 613
GPP P
Sbjct: 782 GGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKPXPPXXGXGGGVXXPPXGGXXFXPXXGXXP 568
PPPP G PP P PP G GG PP G F P P
Sbjct: 342 PPPPPPPGGC-------PPPPPPPPPGGFKGGPPPPPPPG-MFAPMAPVIP 384
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 534 PPXGGXKTPPPXPXXGGXGFXGG 466
PP GG PPP P G GF GG
Sbjct: 346 PPPGGCPPPPPPPPPG--GFKGG 366
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPXGXGGXFXGPXPXPPP 473
PPP GG GP P PPP
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 416 PPPPGXXGXXFXXXXXXPPXKP---XPPXXGXGGGVXXPPXGGXXFXPXXGXXPXKKFFL 586
PPPP G PP P PP G G PP GG P P F
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGG---CPPPPPPPPPGGFK 364
Query: 587 XGPPXXXNP 613
GPP P
Sbjct: 365 GGPPPPPPP 373
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPXGXGGXFXGPXPXPPP 473
PPP GG + P P PPP
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 525 GGXKTPPPXPXXGGXGFXGGXXXXXXKXXPXXPGGGGF 412
GG PPP P GG G P P GGG+
Sbjct: 26 GGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGY 63
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 366 FXXPGGGXGXFXXXKKTPPPXGXGGXFXGPXPXPPPKNPXPXXLGXGXG 512
+ P GG G F PPP G G P PP P P G G
Sbjct: 423 YGPPQGGPGGFGP----PPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 412 KPPPPXXXGVXFXXPXPXPPXKTXXPXXWXG 504
+PPPP G+ + P P PP +T P G
Sbjct: 286 RPPPPPSSGM-WPPPPPPPPGRTPGPPGMPG 315
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +3
Query: 417 PPPXGXGGXFXGPXPXPPPKNPXPXXLGXGXGFXXPXXGXXXXPXXPGXXP 569
PPP G + P P PP + P P + G P P G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGM---PGMPPPPPPSRFGPPGMGGMP 334
>U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical
protein F12A10.1 protein.
Length = 120
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 771 GWERGXXGGFFXGXPXXFFNSGGXXPPXNGG 679
GW G GG+ G P + GG P GG
Sbjct: 58 GWGGGYPGGYGGGYPGGYSGYGGGYPGMYGG 88
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 412 KPPPPXXXGVXFXXPXPXPPXKTXXPXXWXG 504
+PPPP G+ + P P PP +T P G
Sbjct: 296 RPPPPPSSGM-WPPPPPPPPGRTPGPPGMPG 325
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +3
Query: 417 PPPXGXGGXFXGPXPXPPPKNPXPXXLGXGXGFXXPXXGXXXXPXXPGXXP 569
PPP G + P P PP + P P + G P P G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGM---PGMPPPPPPSRFGPPGMGGMP 344
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 415 PPPPXXXGVXFXXPXPXPPXKTXXPXXWXGGXGFXXPXG 531
PPPP GV + P P P T P G P G
Sbjct: 40 PPPPVGAGVGYAPPPPRPYGATYAPPPPMGIGAGVNPSG 78
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/95 (25%), Positives = 32/95 (33%)
Frame = +2
Query: 521 PPXGGXXFXPXXGXXPXKKFFLXGPPXXXNPKKXXXGGFXQXXXXXXXXXXXXPPXXGGX 700
PP GG P P + + GPP P GG+ P G
Sbjct: 673 PPGGGQGPPPP----PQGQQYYGGPPPPGQPY-GPPGGYPPQQQRPPYQAQPYP----GP 723
Query: 701 XPPELKKXXGFPXKXPPXXPLSXPXX*XKKTPXPP 805
PP+ ++ G+P P P P + P PP
Sbjct: 724 PPPQQQRGYGYPPPPQPGHPYQQPYG---QMPPPP 755
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/95 (25%), Positives = 32/95 (33%)
Frame = +2
Query: 521 PPXGGXXFXPXXGXXPXKKFFLXGPPXXXNPKKXXXGGFXQXXXXXXXXXXXXPPXXGGX 700
PP GG P P + + GPP P GG+ P G
Sbjct: 673 PPGGGQGPPPP----PQGQQYYGGPPPPGQPY-GPPGGYPPQQQRPPYQAQPYP----GP 723
Query: 701 XPPELKKXXGFPXKXPPXXPLSXPXX*XKKTPXPP 805
PP+ ++ G+P P P P + P PP
Sbjct: 724 PPPQQQRGYGYPPPPQPGHPYQQPYG---QMPPPP 755
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 487 GXGFXGGGXGXGPKXXPPXPXGGG 416
G G G G G G PP P GGG
Sbjct: 198 GGGSGGSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,836,011
Number of Sequences: 27780
Number of extensions: 208871
Number of successful extensions: 1364
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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