Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O09
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 110 6e-24
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 110 6e-24
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 110 6e-24
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 110 6e-24
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 110 6e-24
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 104 4e-22
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 34 0.82
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 34 0.82
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 34 0.82
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 34 0.82
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 34 0.82
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 110 bits (265), Expect = 6e-24
Identities = 46/72 (63%), Positives = 60/72 (83%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P L +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E
Sbjct: 58 EPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKE 117
Query: 476 TPALDVLKDYLK 511
+ A DV+++Y K
Sbjct: 118 SQAKDVIEEYFK 129
Score = 91.1 bits (216), Expect = 5e-18
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = +1
Query: 139 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 318
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 110 bits (265), Expect = 6e-24
Identities = 46/72 (63%), Positives = 60/72 (83%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P L +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E
Sbjct: 58 EPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKE 117
Query: 476 TPALDVLKDYLK 511
+ A DV+++Y K
Sbjct: 118 SQAKDVIEEYFK 129
Score = 91.1 bits (216), Expect = 5e-18
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = +1
Query: 139 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 318
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 110 bits (265), Expect = 6e-24
Identities = 46/72 (63%), Positives = 60/72 (83%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P L +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E
Sbjct: 58 EPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKE 117
Query: 476 TPALDVLKDYLK 511
+ A DV+++Y K
Sbjct: 118 SQAKDVIEEYFK 129
Score = 91.1 bits (216), Expect = 5e-18
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = +1
Query: 139 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 318
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 110 bits (265), Expect = 6e-24
Identities = 46/72 (63%), Positives = 60/72 (83%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P L +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E
Sbjct: 58 EPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKE 117
Query: 476 TPALDVLKDYLK 511
+ A DV+++Y K
Sbjct: 118 SQAKDVIEEYFK 129
Score = 91.1 bits (216), Expect = 5e-18
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = +1
Query: 139 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 318
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 110 bits (265), Expect = 6e-24
Identities = 46/72 (63%), Positives = 60/72 (83%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P L +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E
Sbjct: 58 EPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKE 117
Query: 476 TPALDVLKDYLK 511
+ A DV+++Y K
Sbjct: 118 SQAKDVIEEYFK 129
Score = 91.1 bits (216), Expect = 5e-18
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = +1
Query: 139 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 318
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 104 bits (250), Expect = 4e-22
Identities = 44/72 (61%), Positives = 58/72 (80%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P L +AL EHQI L+KVD+NKKLGEW GLCKID++G RK+VGCSCVV+KD+G+E
Sbjct: 58 EPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKE 117
Query: 476 TPALDVLKDYLK 511
+ A DV+++Y K
Sbjct: 118 SQAKDVIEEYFK 129
Score = 88.6 bits (210), Expect = 3e-17
Identities = 44/60 (73%), Positives = 46/60 (76%)
Frame = +1
Query: 139 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 318
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 297
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 297
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 297
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 297
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 297
V AL+EVL AL + G++EAAK L D VLC+LA + D+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,802,595
Number of Sequences: 237096
Number of extensions: 1766259
Number of successful extensions: 3997
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3994
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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