Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O09
(911 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 123 3e-28
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 123 3e-28
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 123 3e-28
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 123 3e-28
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 69 9e-12
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 123 bits (297), Expect = 3e-28
Identities = 52/72 (72%), Positives = 65/72 (90%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P+ + L ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEE
Sbjct: 77 EPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEE 136
Query: 476 TPALDVLKDYLK 511
TPALDV+KD+L+
Sbjct: 137 TPALDVVKDHLR 148
Score = 101 bits (242), Expect = 1e-21
Identities = 51/75 (68%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Frame = +1
Query: 100 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 276
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+
Sbjct: 12 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCI 70
Query: 277 LAENCDEAAYKKLVS 321
LAE+ DE YKKLV+
Sbjct: 71 LAESFDEPNYKKLVT 85
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 123 bits (297), Expect = 3e-28
Identities = 52/72 (72%), Positives = 65/72 (90%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P+ + L ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEE
Sbjct: 65 EPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEE 124
Query: 476 TPALDVLKDYLK 511
TPALDV+KD+L+
Sbjct: 125 TPALDVVKDHLR 136
Score = 99.5 bits (237), Expect = 6e-21
Identities = 50/74 (67%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +1
Query: 103 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 279
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 280 AENCDEAAYKKLVS 321
AE+ DE YKKLV+
Sbjct: 60 AESFDEPNYKKLVT 73
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 123 bits (297), Expect = 3e-28
Identities = 52/72 (72%), Positives = 65/72 (90%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P+ + L ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEE
Sbjct: 65 EPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEE 124
Query: 476 TPALDVLKDYLK 511
TPALDV+KD+L+
Sbjct: 125 TPALDVVKDHLR 136
Score = 99.5 bits (237), Expect = 6e-21
Identities = 50/74 (67%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +1
Query: 103 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 279
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 280 AENCDEAAYKKLVS 321
AE+ DE YKKLV+
Sbjct: 60 AESFDEPNYKKLVT 73
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 123 bits (297), Expect = 3e-28
Identities = 52/72 (72%), Positives = 65/72 (90%)
Frame = +2
Query: 296 KPHTRNLFQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEE 475
+P+ + L ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEE
Sbjct: 65 EPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEE 124
Query: 476 TPALDVLKDYLK 511
TPALDV+KD+L+
Sbjct: 125 TPALDVVKDHLR 136
Score = 99.5 bits (237), Expect = 6e-21
Identities = 50/74 (67%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +1
Query: 103 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 279
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 280 AENCDEAAYKKLVS 321
AE+ DE YKKLV+
Sbjct: 60 AESFDEPNYKKLVT 73
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 68.9 bits (161), Expect = 9e-12
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 255
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,670,527
Number of Sequences: 53049
Number of extensions: 521656
Number of successful extensions: 1397
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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