Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_O07
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0428 + 13899295-13899669                                         29   3.8  
02_05_0067 + 25557975-25558553                                         29   5.1  
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284...    29   6.7  
06_03_0853 - 25384198-25384731,25384810-25385210,25385816-25386011     28   8.9  
06_01_0486 - 3455030-3455770                                           28   8.9  
01_06_0482 - 29672720-29673854,29673941-29676267                       28   8.9  

>05_03_0428 + 13899295-13899669
          Length = 124

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 426 GGSRKHWCWRTCARRGXAPATAC 494
           GGSR+HW   T +R   +PA  C
Sbjct: 78  GGSRRHWTCSTSSRSCRSPAPVC 100


>02_05_0067 + 25557975-25558553
          Length = 192

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 396 CSPRCTARGRGGSRKHWCWRTCARRGXAPATACAP-WTGSTRA 521
           C+P  T R    SR H C   C      P  AC+P  TGST+A
Sbjct: 40  CNPSGTLRP---SRSHSCQDCCKAGRSYPTYACSPATTGSTKA 79


>01_06_1164 - 35026345-35026954,35027853-35027939,35028120-35028493,
            35037372-35038586,35038659-35039316,35039331-35041012
          Length = 1541

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 148  GAVVEPQHHVAEHRAGAGPAPRCPSCRARCPSXTS 44
            G   EP        AGAGP P CP  ++R  +  S
Sbjct: 1161 GEAPEPNGGPRPPTAGAGPPPACPKAQSRLAAAAS 1195


>06_03_0853 - 25384198-25384731,25384810-25385210,25385816-25386011
          Length = 376

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 329 EELSKLYRALEEERGVAEPERFVFPALYGARSRRLEEALVL 451
           EE  K   AL+EER   E E+F F      ++ ++EE  +L
Sbjct: 328 EERCKRAFALQEERNKLEREKFEFQKKEAEKAEKVEEERIL 368


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 133 PQHHVAEHRAGAGPAPRCPSC 71
           P+HH   H     P+PRCPSC
Sbjct: 58  PEHH---HHHKPPPSPRCPSC 75


>01_06_0482 - 29672720-29673854,29673941-29676267
          Length = 1153

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +2

Query: 263 KMSENVRAHAINSV-YDTELLVYEELSKLYRALEEERGVAEPERFVFPALYGARSRRLEE 439
           K    V+A ++ +V  D E  +  EL  L   L     V EPE+F  P + G RSRRL  
Sbjct: 441 KKDSMVKAVSLPTVELDGEDQLDAELEDL-GCLINSLSVVEPEQFDSPIVEGKRSRRLSC 499

Query: 440 ALVLEDLRASGXGPRDR 490
             V E   ++    R R
Sbjct: 500 VGVTEGCNSASRMIRSR 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.136    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,233,472
Number of Sequences: 37544
Number of extensions: 226476
Number of successful extensions: 843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)