Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O06
(931 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 30 2.7
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 30 2.7
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 30 2.7
U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase... 29 3.6
AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinas... 29 3.6
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 733 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 787
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 788 PLISRRRFDQMT 799
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 757 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 811
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 812 PLISRRRFDQMT 823
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 743 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 797
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 798 PLISRRRFDQMT 809
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 748 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 802
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 803 PLISRRRFDQMT 814
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 389 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 443
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 444 PLISRRRFDQMT 455
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 453 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 507
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 508 PLISRRRFDQMT 519
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 408 NLNGTRQERDKRVLKKNTKKIIESLICFF*FGVALGNVVLSISTTSGWQSLSQSPEPDSF 587
N NGT E D ++K KK ++C AL V L I T SG L +S + +
Sbjct: 748 NSNGTPAENDAPEIRKYKKKFSGEILC-----AALWGVNLLIGTDSGLMLLDRSGQGKVY 802
Query: 588 RDVHRYKARNLT 623
+ R + +T
Sbjct: 803 PLISRRRFDQMT 814
>U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase c
protein 3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 246 KWK-MYCHEAHRFGSKAINAFISCFKISDGI 157
+WK +Y + HRF +K +N I CF D I
Sbjct: 118 RWKKIYLYNGHRFQAKRLNRRIQCFICHDYI 148
>AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinase
C3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 246 KWK-MYCHEAHRFGSKAINAFISCFKISDGI 157
+WK +Y + HRF +K +N I CF D I
Sbjct: 118 RWKKIYLYNGHRFQAKRLNRRIQCFICHDYI 148
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 495 KKNRLNFQ*FFLYFFSKLSCHALVWSHSSFVRISPVILWVIL 370
KKN+L F + +F + + W + VRIS W +L
Sbjct: 201 KKNQLRFYNMYYHFVKETYPEIMKWLKNDLVRISAPPCWQVL 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,926,333
Number of Sequences: 27780
Number of extensions: 374493
Number of successful extensions: 971
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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