Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_O03
(920 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.033
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.043
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.057
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.13
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.53
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.93
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.9
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 6.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +1
Query: 679 LXXXPPXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPP 858
L PP P + P P P PP P P P PPG P PPP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAP----IMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Query: 859 XPS 867
S
Sbjct: 784 AVS 786
Score = 29.5 bits (63), Expect = 0.70
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 712 LXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXNP 876
L PP P P P P P P P P P PP P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 754 PPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXNPXXXXXXPSSP 906
PPPP P P P P P P PPP P P P
Sbjct: 732 PPPP--PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.033
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +1
Query: 727 PXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXNPXXXXXXPSSP 906
P P P P P P P PP P P PP PS P P++P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRP-SIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAP 180
Query: 907 VRXP 918
V+ P
Sbjct: 181 VKSP 184
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 691 PPXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXP 864
PP P P P P PPP P P P P P PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA--PSLPSAVPPMPPKVPPPP 205
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPP-GXPXXXPXXXXXPPPXPSX 870
P P P P PP PP P P P PP P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSP-ASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 871 NPXXXXXXPSSPVRXP 918
P P P + P
Sbjct: 187 APSLPSAVPPMPPKVP 202
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.043
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = +1
Query: 691 PPXXPXPLXXXPPXX---GPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPX 861
PP P L P G P P PP P P P G P P P PPP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP--IAPPLPAGMPAAPP--LPPAAPAPPPA 479
Query: 862 PSXNP 876
P+ P
Sbjct: 480 PAPAP 484
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Frame = +1
Query: 745 PXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXP------PPXPSXNPXXXXXXPSSP 906
P P PP P P PP P P P PP P+ P P++P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 907 VRXP 918
P
Sbjct: 475 APPP 478
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/77 (24%), Positives = 19/77 (24%), Gaps = 1/77 (1%)
Frame = +1
Query: 691 PPXXPX-PLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPS 867
PP P PP PP P P PP P P PP P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Query: 868 XNPXXXXXXPSSPVRXP 918
P P P
Sbjct: 452 SAPIAPPLPAGMPAAPP 468
Score = 29.5 bits (63), Expect = 0.70
Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGP--PPXXPPPPXGPXXXXXPXPXGXP--PGXPXXXPXXXXXPPPX 861
P P P PP P PP PP P P P P P P PP
Sbjct: 415 PPVPTP-PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 862 PSXNPXXXXXXPSSPV 909
P+ P P++PV
Sbjct: 474 PAP-PPAPAPAPAAPV 488
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Frame = +1
Query: 739 PPPXXPPPPXGPXXXXXPXPX----GXPPGXPXXXPXXXXXPPPXPS 867
PPP PPPP P P PP P P PPP S
Sbjct: 337 PPP--PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
Score = 28.3 bits (60), Expect = 1.6
Identities = 30/134 (22%), Positives = 32/134 (23%), Gaps = 3/134 (2%)
Frame = +1
Query: 421 PXXGXXXPGXXPAXVXPPXGXRPXXXXRXXGXX-PPXXXPA-PGLPXPXXPXXXTXXXXP 594
P G P P P G +P PP PA PG P P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 595 XXRXXGXXXXXXXXX-QXPXNAGXXXAXXLXXXPPXXPXPLXXXPPXXGPPPXXPPPPXG 771
P +A PP P P G P P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 772 PXXXXXPXPXGXPP 813
P P P P
Sbjct: 474 PAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.057
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXN 873
P P P PP P P P P P G P P P P P PS
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP---PVPKPSVAAPPVPAPSGA 1158
Query: 874 PXXXXXXPSSP 906
P ++P
Sbjct: 1159 PPVPKPSVAAP 1169
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXN 873
P P P PP P PP P P P P PP P PP P +
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPK-PAAGVPPVP---PPSEAPPVPKPSVGVPPVPPPS 1214
Query: 874 PXXXXXXPSS 903
PS+
Sbjct: 1215 TAPPVPTPSA 1224
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXN 873
P P P PP P P PP P P P P P P P PS
Sbjct: 1140 PPVPKPSVAAPPV--PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 874 P 876
P
Sbjct: 1198 P 1198
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXP 864
P P P PP PP PP P P P P PP P PP P
Sbjct: 1179 PPVPKPAAGVPPVP-PPSEAPPVPK-PSVGVPPVP---PPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/102 (25%), Positives = 28/102 (27%), Gaps = 14/102 (13%)
Frame = +1
Query: 646 PXNAGXXXAXXLXXXPPXXPXPLXXX----PPXXGPPPXXPPP----------PXGPXXX 783
P N G + PP P PL P PP PP P P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLAR 1010
Query: 784 XXPXPXGXPPGXPXXXPXXXXXPPPXPSXNPXXXXXXPSSPV 909
P P P P P P PS P + PV
Sbjct: 1011 VPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPV 1052
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +1
Query: 703 PXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSXN-PX 879
P P P P PP P P P G P P P P PS P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK-PAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 880 XXXXXPSSPVRXP 918
+ PV P
Sbjct: 1210 VPPPSTAPPVPTP 1222
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPP-PPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPSX 870
P P P PP P PP P P P G P P P P P PS
Sbjct: 1083 PPVPAP-SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP---PVPKPSVAAPPVPVPSG 1138
Query: 871 NPXXXXXXPSSP 906
P ++P
Sbjct: 1139 APPVPKPSVAAP 1150
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 7/68 (10%)
Frame = +1
Query: 724 PPXXGPPPXXPPPPXGPXXXXXPXPXGXPP-------GXPXXXPXXXXXPPPXPSXNPXX 882
PP P P P P P G PP P P P P PS P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 883 XXXXPSSP 906
++P
Sbjct: 1124 PKPSVAAP 1131
Score = 25.8 bits (54), Expect = 8.6
Identities = 28/144 (19%), Positives = 30/144 (20%)
Frame = +1
Query: 391 PXPFXPXPFXPXXGXXXPGXXPAXVXPPXGXRPXXXXRXXGXXPPXXXPAPGLPXPXXPX 570
P P P P P P+ PP PP P+ P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV--------PSGAPPVPKPSVAAPPVPAPS 1156
Query: 571 XXTXXXXPXXRXXGXXXXXXXXXQXPXNAGXXXAXXLXXXPPXXPXPLXXXPPXXGPPPX 750
P P A P P P PP P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 751 XPPPPXGPXXXXXPXPXGXPPGXP 822
P P P P P P
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVP 1240
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +1
Query: 691 PPXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXP 864
P P P PP PPPP P P P G P P P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAP-----PMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +1
Query: 694 PXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXPXXXPXXXXXPPPXPS 867
P P P PP P P P P PP P P PPP P+
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP-MPAGPP--SAPPPPLPA 1737
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 691 PPXXPXPLXXXPPXXGPPPXXPPPP 765
PP P P PPP PPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 691 PPXXPXPLXXXPPXXGPPPXXPPPPXGP 774
PP P P PP PP PPPP P
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 727 PXXGPPPXXPPPPXGPXXXXXPXPXGXPPG 816
P PPP PPP P P P PPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP---PPG 31
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 709 PLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXP 822
PL PP P P P P P P PG P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEP 139
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +1
Query: 691 PPXXPXPLXXXPPXXGPPPXXPPPPXGPXXXXXPXPXGXPPGXP 822
P P+ P G P PPPP G PG P
Sbjct: 269 PGMPAMPMMNVPMGPGGAPLVPPPPPGMVMASPSPAAATIPGAP 312
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,443,986
Number of Sequences: 5004
Number of extensions: 18725
Number of successful extensions: 198
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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