Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_N22
(1044 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 40 0.003
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.063
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.063
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.063
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 33 0.34
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 33 0.34
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.45
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.45
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.45
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 32 0.59
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 32 0.78
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 32 0.78
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 26 0.97
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 26 0.97
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 26 0.98
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.0
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 31 1.4
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 31 1.4
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 1.8
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 25 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 2.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 2.2
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 25 2.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 2.4
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 30 2.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.4
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 25 3.0
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 25 3.0
AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical ... 30 3.1
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 30 3.1
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 4.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 5.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 5.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 5.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 5.9
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 5.9
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 24 6.2
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 24 6.2
AC024877-1|AAF60906.2| 138|Caenorhabditis elegans Hypothetical ... 26 7.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 7.3
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 26 7.6
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 26 7.6
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.6
AL033514-20|CAA22086.1| 169|Caenorhabditis elegans Hypothetical... 28 9.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/81 (29%), Positives = 24/81 (29%)
Frame = -3
Query: 1018 GGGGGGXXXXXXXXXQXTXPPPPPPXXXGGXXXXGXXXXXXXXXXXPPXXXXXXXXXGXX 839
G GGGG PPPPPP GG G
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Query: 838 XXXGGGXGGGXXXXXXPPPPP 776
G G GGG PPPPP
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPP 115
Score = 38.7 bits (86), Expect = 0.007
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXPXXPXXXXXXXXGGGXXXXXXXXXXXRXAXXXXXRXGG 951
G GGG G PPPPPP GGG GG
Sbjct: 41 GCGGGGGCGGGCAPPPPPP------ACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGG 94
Query: 952 GGGXXXFVXXXXXXXXPPPPPP 1017
GGG PPPPPP
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPP 116
Score = 37.5 bits (83), Expect = 0.016
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = -2
Query: 1034 GXXXXGGGGGGGXXXXXXXXTXHXXPPPPPXRXXXXXAXRXXXXXXXXXXXPPPXXXXXX 855
G GG GGGG PPPPP
Sbjct: 29 GGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Query: 854 XXGXXGXXGGGGGGGXXXAXXPXPPPXPXXXXG 756
G G GG GGGG PPP P G
Sbjct: 89 GGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -3
Query: 1015 GGGGGXXXXXXXXXQXTXPPPPPPXXXGGXXXXGXXXXXXXXXXXPPXXXXXXXXXGXXX 836
GGGGG PPPPPP GG G G
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG--GGGCGGGGGGGCG 150
Query: 835 XXGGGXGGG 809
GGG GGG
Sbjct: 151 GGGGGCGGG 159
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 588 GGGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGGXXPXXXXXPPPP 445
GGG GGG GGG GG GG PPPP
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPP 114
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 1026 GXXGGGGGGXXXXXXXXXKXXXPPPPPXPXXXXGG 922
G GGGGGG PPPPP GG
Sbjct: 90 GGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGG 124
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 562 GGXGXXXXXXXGGXGGXXPXXXGGGGGXXPXXXXXPPPP 446
GG G GG GG GGGGG PPPP
Sbjct: 23 GGGGGGGGGCGGGCGGGGGC--GGGGGCGGGCAPPPPPP 59
Score = 29.9 bits (64), Expect = 3.1
Identities = 29/107 (27%), Positives = 29/107 (27%), Gaps = 7/107 (6%)
Frame = +2
Query: 662 PXPPPX-----GGGGXXCFXXFXXXXXXXXXXXXXXXPXXXXGG-GGGXGXXPXXXPPXP 823
P PPP GGGG C GG GGG G PP P
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPP 114
Query: 824 PPXXXPXXXXXXXXXXXG-GGXXXXXXXXXXXAXPPXXXXGXGGGGG 961
PP G GG G GGGGG
Sbjct: 115 PPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.063
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 453 GGXXXXXGXXPPPPPXXXGXXPPXPPXXXXXXXPXPP 563
GG G PPPPP G PP PP PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPPXXXXXXXPXPPXFFXXFLP 587
PPPPP PP PP P PP F P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = +3
Query: 450 GGGXXXXXGXXPPPP----PXXXGXXPPXPPXXXXXXXPXPP 563
GG G PPPP P G PP PP P PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 450 GGGXXXXXGXXPPPPPXXXGXXPPXPP----XXXXXXXPXPPXFFXXFLP 587
GG G PPPPP PP PP P PP F P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.063
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 453 GGXXXXXGXXPPPPPXXXGXXPPXPPXXXXXXXPXPP 563
GG G PPPPP G PP PP PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPPXXXXXXXPXPPXFFXXFLP 587
PPPPP PP PP P PP F P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = +3
Query: 450 GGGXXXXXGXXPPPP----PXXXGXXPPXPPXXXXXXXPXPP 563
GG G PPPP P G PP PP P PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 450 GGGXXXXXGXXPPPPPXXXGXXPPXPP----XXXXXXXPXPPXFFXXFLP 587
GG G PPPPP PP PP P PP F P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.063
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 453 GGXXXXXGXXPPPPPXXXGXXPPXPPXXXXXXXPXPP 563
GG G PPPPP G PP PP PP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 31.9 bits (69), Expect = 0.78
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPPXXXXXXXPXPPXFFXXFLP 587
PPPPP PP PP P PP F P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = +3
Query: 450 GGGXXXXXGXXPPPP----PXXXGXXPPXPPXXXXXXXPXPP 563
GG G PPPP P G PP PP P PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +3
Query: 450 GGGXXXXXGXXPPPPPXXXGXXPPXPP----XXXXXXXPXPPXFFXXFLP 587
GG G PPPPP PP PP P PP F P
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.11
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXP 840
G GGG G PPPPPPP P
Sbjct: 84 GGGGGYGRPQGYVPPPPPPPTQP 106
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 521 GWXXPXXXGGGXGXAPPXXXXPPPPP 444
G+ P GGG G P PPPPP
Sbjct: 76 GYNRPYGGGGGGGYGRPQGYVPPPPP 101
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 447 GGGGXXXXXGXXPPPPPXXXGXXPPXPPXXXXXXXPXP 560
GGGG G PPPPP P P P P
Sbjct: 85 GGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQP 122
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 882 PPPXXXXXXXXXXXGXXXGGGXGGXXXGXXPXPPPPP 772
PPP G GGG G G P PPPPP
Sbjct: 70 PPPFDGGYNRPYGGG---GGGGYGRPQGYVPPPPPPP 103
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 771 GXGGGGGXXXXXXPPPXPPP 830
G GGG G PPP PPP
Sbjct: 84 GGGGGYGRPQGYVPPPPPPP 103
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.15
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 474 GXXPPPPPXXXGXXPPXPPXXXXXXXPXPPXF 569
G PPPPP G PP PP P PP F
Sbjct: 81 GGIPPPPPMFAGGIPP-PPPMMGGIPPPPPMF 111
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 474 GXXPPPPPXXXGXXPPXPPXXXXXXXPXPP 563
G PPPPP G PP PP P PP
Sbjct: 92 GGIPPPPPM-MGGIPPPPPMFGAPPPPPPP 120
Score = 32.3 bits (70), Expect = 0.59
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 474 GXXPPPPPXXXGXXPPXPPXXXXXXXPXPP 563
G PPPPP G PP PP P PP
Sbjct: 102 GGIPPPPPM-FGAPPPPPPPSGLGVAPQPP 130
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 489 PPPXXXGXXPPXPPXXXXXXXPXPP 563
PPP G PP PP P PP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPP 99
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 33.1 bits (72), Expect = 0.34
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXP 840
G GGG A PPPPPPP P
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAP 72
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 33.1 bits (72), Expect = 0.34
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXP 840
G GGG A PPPPPPP P
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAP 72
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.45
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXPXXPXXXXXXXXGGG 882
G GG G A PPPPPP P P GGG
Sbjct: 288 GSSGGGGYSAPAAAPPPPPP--PPPPPAPAPVSSGGG 322
Score = 32.3 bits (70), Expect = 0.59
Identities = 31/120 (25%), Positives = 31/120 (25%)
Frame = -1
Query: 840 GXXXGGGXGGXXXGXXPXPPPPPXXXXGXXXXXXXXXXXXXXXXXKKQXXPPPPXGGGXG 661
G GGG GG G PPP G PP P GGG G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGC------APPPAPCGGGCG 84
Query: 660 XXXXXXXXXXXXXXXXXXXXXXXXGGGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGG 481
G G GGG GGG GGG GG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG---CGGGGGGGCGG 141
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 585 GGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGGXXPXXXXXPPPP 445
GG GGG GGG GG G P PPPP
Sbjct: 261 GGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = -3
Query: 1039 SAXXXXXGGGGGGXXXXXXXXXQXTXPPPPPPXXXGGXXXXGXXXXXXXXXXXPPXXXXX 860
SA GGG GG PPP P G G P
Sbjct: 24 SAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGC 83
Query: 859 XXXXGXXXXXGGGXGGG 809
G GGG GGG
Sbjct: 84 GGGGGGCGGGGGGCGGG 100
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPPPXP 771
G G GGGG A P PPP P
Sbjct: 285 GYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 588 GGGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGG 481
GGG GGG GGG GGG GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGG 61
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -1
Query: 1026 GXXGGGG-GGXXXXXXXXXKXXXPPPPPXPXXXXGGXAXXXXXXXXXXXPPPXXXXXXXX 850
G GGGG GG PPP P GG PPP
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGG--GCGGGGGCAPPPAPCGGGCG 84
Query: 849 XXXGXXXGGGXG 814
G GGG G
Sbjct: 85 GGGGGCGGGGGG 96
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.45
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXPXXPXXXXXXXXGGG 882
G GG G A PPPPPP P P GGG
Sbjct: 288 GSSGGGGYSAPAAAPPPPPP--PPPPPAPAPVSSGGG 322
Score = 32.3 bits (70), Expect = 0.59
Identities = 31/120 (25%), Positives = 31/120 (25%)
Frame = -1
Query: 840 GXXXGGGXGGXXXGXXPXPPPPPXXXXGXXXXXXXXXXXXXXXXXKKQXXPPPPXGGGXG 661
G GGG GG G PPP G PP P GGG G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGC------APPPAPCGGGCG 84
Query: 660 XXXXXXXXXXXXXXXXXXXXXXXXGGGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGG 481
G G GGG GGG GGG GG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG---CGGGGGGGCGG 141
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 585 GGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGGXXPXXXXXPPPP 445
GG GGG GGG GG G P PPPP
Sbjct: 261 GGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = -3
Query: 1039 SAXXXXXGGGGGGXXXXXXXXXQXTXPPPPPPXXXGGXXXXGXXXXXXXXXXXPPXXXXX 860
SA GGG GG PPP P G G P
Sbjct: 24 SAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGC 83
Query: 859 XXXXGXXXXXGGGXGGG 809
G GGG GGG
Sbjct: 84 GGGGGGCGGGGGGCGGG 100
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPPPXP 771
G G GGGG A P PPP P
Sbjct: 285 GYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 588 GGGXXKRRXGGGXXXXXXXGGGXVXXXXXXGGGXGG 481
GGG GGG GGG GGG GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGG 61
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -1
Query: 1026 GXXGGGG-GGXXXXXXXXXKXXXPPPPPXPXXXXGGXAXXXXXXXXXXXPPPXXXXXXXX 850
G GGGG GG PPP P GG PPP
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGG--GCGGGGGCAPPPAPCGGGCG 84
Query: 849 XXXGXXXGGGXG 814
G GGG G
Sbjct: 85 GGGGGCGGGGGG 96
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.7 bits (71), Expect = 0.45
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 878 PPXXXXXXXXGXXGXXGGGGGGGXXXAXXPXPPPXPXXXXG 756
PP G G GGGG GG PPP P G
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGG 221
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 1018 GGGGGGXXXXXXXXXQXTXPPPPPPXXXGG 929
GG GGG PPPPPP GG
Sbjct: 193 GGMGGGGGSGGSGGGSGRFPPPPPPYGGGG 222
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPP 828
G GG G + PPPPPP
Sbjct: 199 GGSGGSGGGSGRFPPPPPP 217
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 32.3 bits (70), Expect = 0.59
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 447 GGGGXXXXXGXXPPPPPXXXGXXPPXPP 530
GGGG PPPP G PP PP
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPP 55
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 445 GGGGGXXXXGGAXPXPPPXXXGXXHPXPP 531
GGGGG A PPP G P PP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPP 55
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 447 GGGGXXXXXGXXPPPPPXXXGXXPPXPP 530
GGG PPPPP PP PP
Sbjct: 29 GGGCAPAAPACAPPPPPMCGCAPPPPPP 56
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.9 bits (69), Expect = 0.78
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 526 GXGGXXPXXXGGGGGXXPXXXXXPPPP 446
G GG P GGGGG P PP P
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKP 648
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXP 840
G GGG G P PP PP P
Sbjct: 630 GPGGGGGGGPTGPPAPPKPPAKP 652
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.9 bits (69), Expect = 0.78
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 526 GXGGXXPXXXGGGGGXXPXXXXXPPPP 446
G GG P GGGGG P PP P
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKP 648
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXP 840
G GGG G P PP PP P
Sbjct: 630 GPGGGGGGGPTGPPAPPKPPAKP 652
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 25.8 bits (54), Expect(2) = 0.97
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 811 PPPPPPPXXP 840
PPPPPPP P
Sbjct: 793 PPPPPPPMLP 802
Score = 25.0 bits (52), Expect(2) = 7.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 814 PPPPPPXXPXXP 849
PPPPPP P P
Sbjct: 791 PPPPPPPPPMLP 802
Score = 24.2 bits (50), Expect(2) = 0.97
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 788 APIPPPPPPPP 798
Score = 21.8 bits (44), Expect(2) = 7.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 811 PPPPPPPXXP 840
P PPPPP P
Sbjct: 789 PIPPPPPPPP 798
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.8 bits (54), Expect(2) = 0.97
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 811 PPPPPPPXXP 840
PPPPPPP P
Sbjct: 84 PPPPPPPPPP 93
Score = 24.2 bits (50), Expect(2) = 0.97
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 65 ATPPPPPPPPP 75
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 25.8 bits (54), Expect(2) = 0.98
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 811 PPPPPPPXXP 840
PPPPPPP P
Sbjct: 692 PPPPPPPMLP 701
Score = 25.0 bits (52), Expect(2) = 7.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 814 PPPPPPXXPXXP 849
PPPPPP P P
Sbjct: 690 PPPPPPPPPMLP 701
Score = 24.2 bits (50), Expect(2) = 0.98
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 687 APIPPPPPPPP 697
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 811 PPPPPPPXXP 840
P PPPPP P
Sbjct: 688 PIPPPPPPPP 697
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPPXXXXXXXPXPP 563
PPPPP PP PP P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPP 290
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 474 GXXPPPPPXXXGXXPPXPPXXXXXXXPXPPXFF 572
G PPPPP G P PP P PP F
Sbjct: 294 GMWPPPPPPPPG-RTPGPPGMPGMPPPPPPSRF 325
Score = 29.1 bits (62), Expect = 5.5
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = -1
Query: 960 PPPPPXPXXXXGGXAXXXXXXXXXXXPPPXXXXXXXXXXXGXXXGGGXGGXXXGXXPXPP 781
PPPPP P G PPP G G G P PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMP------PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Query: 780 PPPXXXXGXXXXXXXXXXXXXXXXXKKQXXPPPP 679
PP G PPPP
Sbjct: 352 PPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 23.0 bits (47), Expect(3) = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 348 PPPPPPRYP 356
Score = 22.2 bits (45), Expect(3) = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 817 PPPPPXXPXXP 849
PPPPP P P
Sbjct: 364 PPPPPSRPPAP 374
Score = 21.0 bits (42), Expect(3) = 3.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 811 PPPPPP 828
PPPPPP
Sbjct: 317 PPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPPXXXXXXXPXPP 563
PPPPP PP PP P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPP 300
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 474 GXXPPPPPXXXGXXPPXPPXXXXXXXPXPPXFF 572
G PPPPP G P PP P PP F
Sbjct: 304 GMWPPPPPPPPG-RTPGPPGMPGMPPPPPPSRF 335
Score = 29.1 bits (62), Expect = 5.5
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = -1
Query: 960 PPPPPXPXXXXGGXAXXXXXXXXXXXPPPXXXXXXXXXXXGXXXGGGXGGXXXGXXPXPP 781
PPPPP P G PPP G G G P PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMP------PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Query: 780 PPPXXXXGXXXXXXXXXXXXXXXXXKKQXXPPPP 679
PP G PPPP
Sbjct: 362 PPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 23.0 bits (47), Expect(3) = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 358 PPPPPPRYP 366
Score = 22.2 bits (45), Expect(3) = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 817 PPPPPXXPXXP 849
PPPPP P P
Sbjct: 374 PPPPPSRPPAP 384
Score = 21.0 bits (42), Expect(3) = 3.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 811 PPPPPP 828
PPPPPP
Sbjct: 327 PPPPPP 332
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 949 GGGGXXXFVXXXXXXXXPPPPPPP 1020
GGGG F PPPPPPP
Sbjct: 216 GGGGNNGFFVPVPVVIPPPPPPPP 239
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 946 GGGGGXXXFVXXXXXXXXPPPPPP 1017
GGGG FV PPPPPP
Sbjct: 216 GGGGNNGFFVPVPVVIPPPPPPPP 239
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 941 GXGGGGGXXXLXXXXXXXXXPPPPPPXXP 1027
G GGGG PPPPPP P
Sbjct: 213 GGTGGGGNNGFFVPVPVVIPPPPPPPPGP 241
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 1026 GXXGGGGGGXXXXXXXXXKXXXPPPPPXP 940
G GG GGG PPPPP P
Sbjct: 210 GGLGGTGGGGNNGFFVPVPVVIPPPPPPP 238
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 778 GGGXGXXAXXXPPPPPPPXXPXXP 849
GGG G PPPPPPP P
Sbjct: 23 GGGKGRPPPARPPPPPPPRGVKCP 46
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 497 GGGXGXAPPXXXXPPPPP 444
GGG G PP PPPPP
Sbjct: 23 GGGKGRPPPARPPPPPPP 40
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 1034 GXXXXGGGGGGGXXXXXXXXTXHXXPPPPP 945
G GGGGGGG PPPPP
Sbjct: 14 GGGGGGGGGGGGEAGYSGGAGVEAPPPPPP 43
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 1034 GXXXXGGGGGGGXXXXXXXXTXHXXPPPPP 945
G GGGGGGG PPPPP
Sbjct: 13 GGGGGGGGGGGGGEAGYSGGAGVEAPPPPP 42
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 1026 GXXGGGGGGXXXXXXXXXKXXXPPPPPXP 940
G GGGGGG PPPP P
Sbjct: 15 GGGGGGGGGGGEAGYSGGAGVEAPPPPPP 43
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 811 PPPPPPPXXPXXP 849
PPPPPPP P
Sbjct: 792 PPPPPPPPVATAP 804
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 789 ASEPPPPPPPP 799
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 811 PPPPPPPXXPXXP 849
PPPPPPP P
Sbjct: 651 PPPPPPPSGAGGP 663
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 607 AVPPPPPPPPP 617
Score = 24.2 bits (50), Expect(2) = 6.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 646 AGAPPPPPPPP 656
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 649 PPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 2.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 811 PPPPPPPXXPXXP 849
PPPPPPP P
Sbjct: 477 PPPPPPPSGAGGP 489
Score = 24.2 bits (50), Expect(2) = 2.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 433 AVPPPPPPPPP 443
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 472 AGAPPPPPPPP 482
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 475 PPPPPPPPP 483
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 24.6 bits (51), Expect(2) = 2.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 811 PPPPPPPXXPXXP 849
PPPPPPP P
Sbjct: 476 PPPPPPPPPENEP 488
Score = 24.2 bits (50), Expect(2) = 2.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPPPP
Sbjct: 474 AAPPPPPPPPP 484
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPP 780
G G GGGGGGG P PP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPP 107
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPP 780
G G GGGGGGG P PP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPP 107
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPP 780
G G GGGGGGG P PP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPP 107
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPP 780
G G GGGGGGG P PP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPP 107
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = -2
Query: 848 GXXGXXGGGG---GGGXXXAXXPXPPPXPXXXXG 756
G G GGGG GGG P PPP P G
Sbjct: 45 GGCGYGGGGGCGYGGGYGCGIPPPPPPPPQCGCG 78
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPP 831
G G G G PPPPPPP
Sbjct: 54 GCGYGGGYGCGIPPPPPPPP 73
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 949 GGGGXXXFVXXXXXXXXPPPPPPP 1020
GGGG + PPPPPPP
Sbjct: 50 GGGGGCGYGGGYGCGIPPPPPPPP 73
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 771 GXGGGGGXXXXXXPPPXPPP 830
G G GGG PPP PPP
Sbjct: 54 GCGYGGGYGCGIPPPPPPPP 73
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPP 828
G GGG G PPPPPP
Sbjct: 32 GCGGGGGGGGCCAPPPPPP 50
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 771 GXGGGGGXXXXXXPPPXPP 827
G GGGGG PPP PP
Sbjct: 32 GCGGGGGGGGCCAPPPPPP 50
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 830 GGGGGGGXXXAXXPXPP 780
GGGGGGG A P PP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 27.1 bits (57), Expect(2) = 5.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 840 GXXXGGGXGGXXXGXXPXPPPPP 772
G G G GG G PPPPP
Sbjct: 28 GCGCGCGGGGGGGGCCAPPPPPP 50
Score = 20.6 bits (41), Expect(2) = 5.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 690 PPPPXGGGXG 661
PPPP GG G
Sbjct: 47 PPPPVCGGCG 56
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +3
Query: 474 GXXPPPPPXXXGXXPPX--PPXXXXXXXPXPPXFFXXF 581
G P PPP G PP PP P PP F F
Sbjct: 714 GYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGF 751
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 25.0 bits (52), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 814 PPPPPPXXPXXP 849
PPPPPP P P
Sbjct: 184 PPPPPPIPPPGP 195
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 778 GGGXGXXAXXXPPPPPPPXXP 840
GG P PPPPP P
Sbjct: 171 GGPPHCECENCPKPPPPPPIP 191
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 25.0 bits (52), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 814 PPPPPPXXPXXP 849
PPPPPP P P
Sbjct: 184 PPPPPPIPPPGP 195
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 778 GGGXGXXAXXXPPPPPPPXXP 840
GG P PPPPP P
Sbjct: 171 GGPPHCECENCPKPPPPPPIP 191
>AL132876-8|CAD21660.1| 829|Caenorhabditis elegans Hypothetical
protein Y105E8A.9 protein.
Length = 829
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPP 831
G G G G + PPPPPPP
Sbjct: 662 GVGVGSGAASAQAPPPPPPP 681
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Frame = -1
Query: 690 PPPPXGGGXGXXXXXXXXXXXXXXXXXXXXXXXXGGGXXKRRXGGG--XXXXXXXGGGXV 517
PPPP GGG G GGG GG GGG
Sbjct: 33 PPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGGGYGGAGGFGGAYQAAPAIGGGGSY 92
Query: 516 XXXXXXGGGXGG 481
GGG GG
Sbjct: 93 AGAGPIGGGFGG 104
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPP 780
G G GGGGGG A P PP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPPP 46
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 1039 SAXXXXXGGGGGGXXXXXXXXXQXTXPPPPPP 944
SA GGGGG PPPPPP
Sbjct: 15 SAHCQYSSGGGGGGYSGGGGGGGDAAPPPPPP 46
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 848 GXXGXXGGGGGGGXXXAXXPXPPP 777
G G GGGGG A P PPP
Sbjct: 23 GGGGGGYSGGGGGGGDAAPPPPPP 46
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 772 GXGGGXGXXAXXXPPPPPPPXXPXXP 849
G GG G PPPPPP P
Sbjct: 28 GYSGGGGGGGDAAPPPPPPADAAPAP 53
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPP 530
PPPPP G PP PP
Sbjct: 579 PPPPPPMLGGPPPPPP 594
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 483 PPPPPXXXGXXPPXPP 530
PPPPP G PP PP
Sbjct: 580 PPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 483 PPPPPXXX---GXXPPXPPXXXXXXXPXPP 563
PPPPP G PP PP P PP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 24.6 bits (51), Expect(2) = 4.5
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = -1
Query: 960 PPPPPXPXXXXGGXAXXXXXXXXXXXPPP 874
PPPPP P G PPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPP 591
Score = 24.2 bits (50), Expect(2) = 7.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 811 PPPPPPPXXPXXP 849
PPPPPPP P
Sbjct: 578 PPPPPPPMLGGPP 590
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 811 PPPPPPP 831
PPPPPPP
Sbjct: 561 PPPPPPP 567
Score = 23.0 bits (47), Expect(2) = 7.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 576 PPPPPPPPP 584
Score = 23.0 bits (47), Expect(2) = 4.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 801 GXXPXPPPPPXXXXG 757
G P PPPPP G
Sbjct: 587 GGPPPPPPPPGGLMG 601
Score = 22.6 bits (46), Expect(2) = 7.6
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 757 PXXXXGXGGGXGXXAXXXPPPPPP 828
P G G PPPPPP
Sbjct: 544 PPPIAGLLAANGTNVPIPPPPPPP 567
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 509 PXXXGGGXGXAPPXXXXPPPPP 444
P GGG G APP PPPPP
Sbjct: 20 PSGGGGGCGCAPP----PPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 509 PXXXGGGXGXAPPXXXXPPPPP 444
P GGG G APP PPPPP
Sbjct: 20 PSGGGGGCGCAPP----PPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 509 PXXXGGGXGXAPPXXXXPPPPP 444
P GGG G APP PPPPP
Sbjct: 20 PSGGGGGCGCAPP----PPPPP 37
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.8 bits (54), Expect(2) = 5.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 811 PPPPPPPXXP 840
PPPPPPP P
Sbjct: 576 PPPPPPPPPP 585
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 799 AXXXPPPPPP 828
A PPPPPP
Sbjct: 547 ANGGPPPPPP 556
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 961 PPPPPPXXXGG 929
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 973 QXTXPPPPPP 944
Q + PPPPPP
Sbjct: 761 QSSIPPPPPP 770
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 961 PPPPPPXXXGG 929
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
Score = 22.6 bits (46), Expect(2) = 5.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 973 QXTXPPPPPP 944
Q + PPPPPP
Sbjct: 761 QSSIPPPPPP 770
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 790 GXXAXXXPPPPPPP 831
G PPPPPPP
Sbjct: 439 GLVGRVPPPPPPPP 452
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 445 PPPPPPPPP 453
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 790 GXXAXXXPPPPPPP 831
G PPPPPPP
Sbjct: 387 GLVGRVPPPPPPPP 400
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PPPPPPXXP 840
PPPPPP P
Sbjct: 393 PPPPPPPPP 401
>AC024877-1|AAF60906.2| 138|Caenorhabditis elegans Hypothetical
protein Y95B8A.8 protein.
Length = 138
Score = 25.8 bits (54), Expect(2) = 7.2
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 790 GXXAXXXPPPPPPP 831
G A PPPPPPP
Sbjct: 42 GYAAAQLPPPPPPP 55
Score = 21.4 bits (43), Expect(2) = 7.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 814 PPPPPPXXPXXP 849
PPPPPP P
Sbjct: 49 PPPPPPPPVADP 60
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = -2
Query: 959 PPPPPXRXXXXXAXRXXXXXXXXXXXPPPXXXXXXXXGXXGXXGGGGGGGXXXAXXPXPP 780
PP PP + PP G G G GG G A P PP
Sbjct: 256 PPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPP 315
Query: 779 PXPXXXXG 756
P G
Sbjct: 316 RTPAGGGG 323
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 25.8 bits (54), Expect(2) = 7.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 811 PPPPPPPXXP 840
PPPPPPP P
Sbjct: 1078 PPPPPPPAPP 1087
Score = 21.0 bits (42), Expect(2) = 7.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPP P
Sbjct: 1076 ALPPPPPPPAP 1086
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 25.8 bits (54), Expect(2) = 7.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 811 PPPPPPPXXP 840
PPPPPPP P
Sbjct: 1077 PPPPPPPAPP 1086
Score = 21.0 bits (42), Expect(2) = 7.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 799 AXXXPPPPPPP 831
A PPPPP P
Sbjct: 1075 ALPPPPPPPAP 1085
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 486 PPPPXXXGXXPPXPPXXXXXXXPXPP 563
PPPP PP PP P PP
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCPPPP 268
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 562 GGXGXXXXXXXGGXGGXXPXXXGGGGGXXPXXXXXPPPP 446
G G GG GG GGGGG PP P
Sbjct: 86 GAGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGP 124
>AL033514-20|CAA22086.1| 169|Caenorhabditis elegans Hypothetical
protein Y75B8A.20 protein.
Length = 169
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 494 GGXGXAPPXXXXPPPPP 444
GG G PP PPPPP
Sbjct: 24 GGCGCQPPPICLPPPPP 40
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 799 AXXXPPPPPPPXXPXXP 849
A PPPPPPP P P
Sbjct: 139 AAPPPPPPPPPPAPEAP 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,943,861
Number of Sequences: 27780
Number of extensions: 516317
Number of successful extensions: 12210
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7165
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2772493070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -