Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N17
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
06_01_0964 - 7417158-7417517,7417596-7417868,7418400-7418810,741...    29   3.8  
11_06_0012 + 19251085-19251666                                         29   5.0  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   5.0  
06_03_0218 + 18219956-18220555                                         29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 520 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 678
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>06_01_0964 -
           7417158-7417517,7417596-7417868,7418400-7418810,
           7419270-7419347
          Length = 373

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 25/84 (29%), Positives = 38/84 (45%)
 Frame = +3

Query: 528 FFHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRXPVPTLPLTGYLSAFLPSG 707
           FF    P ++ ++  RS ++ +  T +     +  G SL    +  LP + Y S   P  
Sbjct: 94  FFLNDLPGNDFNQLFRSLEKIKTSTTM-----YHKGDSLPSYYISGLPKS-YYSRLFPRQ 147

Query: 708 SVALSHSSRCRYLXFGVXRSLQAG 779
           SV L HSS C +    V   L+AG
Sbjct: 148 SVHLFHSSYCLHWRSQVPEGLEAG 171


>11_06_0012 + 19251085-19251666
          Length = 193

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -2

Query: 767 RTTYTEXEIPTA*AMRKRHASRREKGGQVSGKRQGRNRXAHEGASRGKRLVS 612
           RTT T  E   A   R+RH  RR+ GG   G R  R      G+  G  +V+
Sbjct: 69  RTTATAVEAQQA-LRRRRHGGRRDSGGGAGG-RGSRGGVGDLGSCGGTAIVA 118


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 764 FAPSWAVCTNPPFSPTAAPYPVTIVLSQP 850
           F P  AV   PP  P AAP PV + +  P
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 707 SRREKGGQVSG--KRQGRNRXAHEGASRGKRLVS 612
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,640,420
Number of Sequences: 37544
Number of extensions: 509040
Number of successful extensions: 1504
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)