Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N17
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06589-2|CAA29813.1|  964|Drosophila melanogaster su(wa) protein...    30   4.9  
X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein...    30   4.9  
AY118635-1|AAM50004.1|  964|Drosophila melanogaster SD01276p pro...    30   4.9  
AL132651-1|CAB65880.1| 1032|Drosophila melanogaster EG:BACR7A4.1...    30   4.9  
AL109630-17|CAB65879.1| 1032|Drosophila melanogaster EG:BACR7A4....    30   4.9  
AE014298-146|AAG22382.2|  963|Drosophila melanogaster CG3019-PA,...    30   4.9  
AE014298-145|ABI30963.1|  927|Drosophila melanogaster CG3019-PF,...    30   4.9  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.6  
AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-P...    29   8.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.6  

>X06589-2|CAA29813.1|  964|Drosophila melanogaster su(wa) protein
           protein.
          Length = 964

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 797 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 827


>X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein
           protein.
          Length = 1042

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 875 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 905


>AY118635-1|AAM50004.1|  964|Drosophila melanogaster SD01276p
           protein.
          Length = 964

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 797 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 827


>AL132651-1|CAB65880.1| 1032|Drosophila melanogaster
           EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
          Length = 1032

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 865 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 895


>AL109630-17|CAB65879.1| 1032|Drosophila melanogaster
           EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
          Length = 1032

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 865 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 895


>AE014298-146|AAG22382.2|  963|Drosophila melanogaster CG3019-PA,
           isoform A protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 796 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 826


>AE014298-145|ABI30963.1|  927|Drosophila melanogaster CG3019-PF,
           isoform F protein.
          Length = 927

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 788 TNPPFSPTAAPYPVTIVLSQPGXTRLIATGS 880
           + P   PTAAP P  ++LS     +L+AT S
Sbjct: 776 SKPVLPPTAAPPPAAVLLSDDDDVQLVATTS 806


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 303 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 398
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-PA
           protein.
          Length = 659

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 686 QVSGKRQGRNRXAHEGASRGK 624
           +V  KR+GRNR AH   SR K
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSK 511


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 303 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 398
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,995,247
Number of Sequences: 53049
Number of extensions: 793302
Number of successful extensions: 2125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)