Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_N16
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0212 + 1412202-1412418,1412789-1412853,1413015-1413063,141...    58   1e-08
12_01_0667 + 5674322-5674393,5674455-5675159,5676051-5676087,567...    31   0.97 
05_01_0149 + 989698-991797                                             30   2.2  
03_06_0386 + 33555682-33556344,33557138-33557299                       30   2.2  
03_02_0583 + 9635002-9637299                                           29   3.9  
04_04_0329 + 24449574-24449633,24450261-24450320,24450510-244505...    29   5.2  
07_01_0756 + 5819367-5820038,5820847-5821005                           28   9.0  

>02_01_0212 +
           1412202-1412418,1412789-1412853,1413015-1413063,
           1413775-1413869,1414024-1414109,1414185-1414244,
           1414322-1414403,1415228-1415341,1415444-1415608
          Length = 310

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 26/65 (40%), Positives = 37/65 (56%)
 Frame = +1

Query: 688 YLKKFMSDVEAWQELCNLYLQVQDYSRAVFCAEEXXXXXXXXXXXXXXXXDIRYTMGGIE 867
           YL+ FM+D +AW+EL   Y+ +Q Y +A FC EE                ++ YTMGG+E
Sbjct: 168 YLELFMADHDAWRELAETYVALQMYKQAAFCYEELILAQPTVPLYHLAYAEVLYTMGGLE 227

Query: 868 NLELA 882
           NL+ A
Sbjct: 228 NLQTA 232



 Score = 32.7 bits (71), Expect = 0.42
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 314 RENNERRGKEVLELWDVVLREDV--NKLGNEKHVILEQVIYAALDCHMYCIAMLCLG 478
           R    RR + VL L   +L +    ++L +E+  + EQV  AA+DC    +A  C+G
Sbjct: 42  RRLRARRPEPVLRLGLALLNDSSARSRLASEQWTLYEQVAVAAMDCQRLDVAKDCIG 98



 Score = 31.5 bits (68), Expect = 0.97
 Identities = 13/29 (44%), Positives = 23/29 (79%)
 Frame = +3

Query: 480 MLSNEFPGSLRVMKLKAAVLEAEEKFDEA 566
           +LS +FPGS+RV +L+A + EA+ ++ +A
Sbjct: 99  VLSKQFPGSMRVGRLEALLFEAKGEWTDA 127


>12_01_0667 +
           5674322-5674393,5674455-5675159,5676051-5676087,
           5676238-5676335,5676452-5676475
          Length = 311

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 904 HRLTVXSLPTPDFRCRPLCTEYQXASDDASGCEADGGVVLRRRTRHESSPE 752
           H L V +LP P     PL   +   SDDA+     GG   R+R R + + E
Sbjct: 171 HHLLVAALPPPTRMVMPLSAMHTSESDDAA-ARPGGGAAARKRFRTKFTAE 220


>05_01_0149 + 989698-991797
          Length = 699

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -2

Query: 406 VFLVSKFVYI--FSENHIPKF*HFFASPLIVFPPLTEKILCFIVAYFFVI 263
           VF+  + +Y+   + N   +  + FA+ ++ FPPL    L F V  FF +
Sbjct: 465 VFVQERHIYLRETAHNAYRRLSYVFANAVVAFPPLVFLSLAFAVTTFFAV 514


>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 696 KVYVRCGSLARALQPVPSGSGLLSCRVLRR 785
           KV  +CGS+   + P P GSG+++ RV ++
Sbjct: 166 KVTGKCGSVTVRMVPAPRGSGIVAARVPKK 195


>03_02_0583 + 9635002-9637299
          Length = 765

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -2

Query: 406 VFLVSKFVYI--FSENHIPKF*HFFASPLIVFPPLTEKILCFIVAYFFVI 263
           VFLV +++Y+   + N   +  +  ++ ++ FPPL    L F    FF +
Sbjct: 530 VFLVERYIYLRETAHNAYRRSSYTVSNAIVAFPPLVALSLAFTAITFFAV 579


>04_04_0329 +
           24449574-24449633,24450261-24450320,24450510-24450562,
           24450913-24450973,24451481-24451666,24451877-24451984,
           24452196-24453418,24453571-24454405
          Length = 861

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +2

Query: 317 ENNERRGKEVLELWDVVLREDVNKLGNEKHVILEQVIYAALD 442
           EN+E+  +   ELW  VL +D ++  +E+  ++EQ+ +   D
Sbjct: 494 ENSEKVAEATCELWLRVLSKDDDECVDEQREVIEQIRFLLKD 535


>07_01_0756 + 5819367-5820038,5820847-5821005
          Length = 276

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 696 KVYVRCGSLARALQPVPSGSGLLSCRVLRR 785
           KV  +CGS+   + P P GSG+++  V ++
Sbjct: 169 KVTGKCGSVTVRMVPAPRGSGIVAAHVPKK 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,111,462
Number of Sequences: 37544
Number of extensions: 437923
Number of successful extensions: 1073
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)